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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
161.1
nTPM
Monaco:
43.1
nTPM
Schmiedel:
191.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.1
HPA sample
nTPM
gdT-cell nTPM: 78.0
Samples: 6
Max nTPM: 96.0
Min nTPM: 49.1
P10809_1007
49.1
P10809_1022
76.9
P10809_1041
96.0
P10809_1060
80.0
P10809_1077
84.8
P10809_1098
81.2
MAIT T-cell nTPM: 104.5
Samples: 6
Max nTPM: 149.4
Min nTPM: 48.7
P10809_1006
48.7
P10809_1024
149.4
P10809_1043
110.9
P10809_1062
101.6
P10809_1083
105.9
P10809_1097
110.7
Memory CD4 T-cell nTPM: 114.4
Samples: 6
Max nTPM: 139.9
Min nTPM: 70.3
P10809_1014
70.3
P10809_1026
139.9
P10809_1045
117.3
P10809_1064
117.2
P10809_1086
120.5
P10809_1113
121.3
Memory CD8 T-cell nTPM: 102.3
Samples: 5
Max nTPM: 135.2
Min nTPM: 64.2
P10809_1012
64.2
P10809_1027
135.2
P10809_1046
85.4
P10809_1065
107.0
P10809_1111
119.9
Naive CD4 T-cell nTPM: 120.7
Samples: 6
Max nTPM: 148.3
Min nTPM: 66.5
P10809_1015
66.5
P10809_1030
143.7
P10809_1049
148.3
P10809_1068
129.5
P10809_1085
123.1
P10809_1112
113.0
Naive CD8 T-cell nTPM: 114.3
Samples: 6
Max nTPM: 160.2
Min nTPM: 68.3
P10809_1016
68.3
P10809_1031
160.2
P10809_1050
107.9
P10809_1069
134.2
P10809_1087
109.1
P10809_1110
106.1
T-reg nTPM: 161.1
Samples: 6
Max nTPM: 199.9
Min nTPM: 70.4
P10809_1018
70.4
P10809_1037
169.7
P10809_1056
199.9
P10809_1075
184.4
P10809_1094
170.2
P10809_1106
172.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 29.0
Samples: 4
Max nTPM: 45.7
Min nTPM: 18.9
RHH5202_R3573
18.9
RHH5230_R3602
24.1
RHH5259_R3631
27.3
RHH5288_R3660
45.7
Effector memory CD8 T-cell nTPM: 20.9
Samples: 4
Max nTPM: 30.5
Min nTPM: 11.8
RHH5203_R3574
11.8
RHH5231_R3603
18.3
RHH5260_R3632
30.5
RHH5289_R3661
22.8
MAIT T-cell nTPM: 29.5
Samples: 4
Max nTPM: 50.4
Min nTPM: 15.3
RHH5233_R3605
23.5
RHH5205_R3576
15.3
RHH5262_R3634
28.6
RHH5297_R3663
50.4
Memory CD4 T-cell TFH nTPM: 33.7
Samples: 4
Max nTPM: 53.2
Min nTPM: 19.5
RHH5300_R3666
34.7
RHH5236_R3608
53.2
RHH5265_R3637
27.5
RHH5208_R3579
19.5
Memory CD4 T-cell Th1 nTPM: 40.4
Samples: 4
Max nTPM: 53.4
Min nTPM: 24.3
RHH5210_R3581
42.3
RHH5302_R3668
53.4
RHH5238_R3610
41.5
RHH5267_R3639
24.3
Memory CD4 T-cell Th1/Th17 nTPM: 43.1
Samples: 4
Max nTPM: 55.7
Min nTPM: 24.2
RHH5303_R3669
55.7
RHH5211_R3582
49.0
RHH5239_R3611
24.2
RHH5268_R3640
43.5
Memory CD4 T-cell Th17 nTPM: 31.4
Samples: 4
Max nTPM: 39.2
Min nTPM: 27.4
RHH5304_R3670
30.6
RHH5212_R3583
39.2
RHH5240_R3612
27.4
RHH5269_R3641
28.3
Memory CD4 T-cell Th2 nTPM: 29.8
Samples: 4
Max nTPM: 37.1
Min nTPM: 22.8
RHH5305_R3671
37.1
RHH5213_R3584
27.4
RHH5241_R3613
31.8
RHH5270_R3642
22.8
Naive CD4 T-cell nTPM: 24.9
Samples: 4
Max nTPM: 30.2
Min nTPM: 22.9
RHH5306_R3672
22.9
RHH5214_R3585
23.4
RHH5242_R3614
23.0
RHH5271_R3643
30.2
Naive CD8 T-cell nTPM: 29.7
Samples: 4
Max nTPM: 35.0
Min nTPM: 20.8
RHH5201_R3572
20.8
RHH5229_R3601
34.2
RHH5258_R3630
28.6
RHH5287_R3659
35.0
Non-Vd2 gdTCR nTPM: 19.2
Samples: 4
Max nTPM: 23.5
Min nTPM: 11.7
RHH5235_R3607
11.7
RHH5264_R3636
21.4
RHH5207_R3578
23.5
RHH5299_R3665
20.1
T-reg nTPM: 39.6
Samples: 4
Max nTPM: 53.4
Min nTPM: 31.8
RHH5301_R3667
53.4
RHH5237_R3609
36.3
RHH5266_R3638
31.8
RHH5209_R3580
36.8
Terminal effector memory CD4 T-cell nTPM: 16.8
Samples: 2
Max nTPM: 21.5
Min nTPM: 12.0
RHH5243_R3615
12.0
RHH5272_R3644
21.5
Terminal effector memory CD8 T-cell nTPM: 35.5
Samples: 4
Max nTPM: 51.1
Min nTPM: 28.0
RHH5232_R3604
33.3
RHH5204_R3575
51.1
RHH5261_R3633
29.7
RHH5296_R3662
28.0
Vd2 gdTCR nTPM: 38.1
Samples: 4
Max nTPM: 65.7
Min nTPM: 21.7
RHH5234_R3606
26.9
RHH5206_R3577
38.0
RHH5263_R3635
21.7
RHH5298_R3664
65.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
