HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:44.8 nTPM
HPA Brain:36.8 nTPM
GTEx:44.8 nTPM
FANTOM5:15.5 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:13.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026745
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.8
Sample id Sample description nTPM
Hippocampus
nTPM: 33.5
1898 Male, age 80, left hemisphere 37.7
2621 Female, age 67, right hemisphere 35.3
1855 Male, age 76, left hemisphere 35.1
2148 Female, age 91, left hemisphere 32.9
2529 Female, age 94, left hemisphere 31.3
1911 Female, age 85, right hemisphere 29.0
Dentate gyrus
nTPM: 33.1
2530 Female, age 94, left hemisphere 38.1
2010 Male, age 76, both hemispheres 36.1
1927 Female, age 91, both hemispheres 34.7
2246 Female, age 85, both hemispheres 33.4
2528 Male, age 74, both hemispheres 30.8
2531 Female, age 67, both hemispheres 25.4
Entorhinal gyrus
nTPM: 32.6
2764 Male, age 80, right hemisphere 35.7
2117 Female, age 91, right hemisphere 34.2
1787 Male, age 76, left hemisphere 33.6
2613 Female, age 94, left hemisphere 33.2
1938 Female, age 85, left hemisphere 30.7
2686 Male, age 75, right hemisphere 28.1
Hippocampus, CA1
nTPM: 36.8
2749 Male, age 80, left hemisphere 46.8
2045 Male, age 76, both hemispheres 37.9
1873 Female, age 85, both hemispheres 37.6
2527 Male, age 74, both hemispheres 35.7
2082 Female, age 91, right hemisphere 26.3
Hippocampus, CA2
nTPM: 33.7
1963 Male, age 80, left hemisphere 47.7
1892 Male, age 76, both hemispheres 38.2
2249 Male, age 74, both hemispheres 33.2
2437 Female, age 94, left hemisphere 31.1
2113 Female, age 91, right hemisphere 26.6
1940 Female, age 85, left hemisphere 25.7
Hippocampus, CA3
nTPM: 34.6
2436 Male, age 74, both hemispheres 41.4
2137 Male, age 80, left hemisphere 38.0
2861 Female, age 67, both hemispheres 32.9
1867 Male, age 76, both hemispheres 32.5
2620 Female, age 94, left hemisphere 32.4
1891 Female, age 85, both hemispheres 30.6
Parahippocampal cortex
nTPM: 28.9
1933 Female, age 85, both hemispheres 34.3
2692 Male, age 74, both hemispheres 33.1
1850 Male, age 80, both hemispheres 30.6
2622 Female, age 67, right hemisphere 29.2
2245 Female, age 91, both hemispheres 29.0
2018 Male, age 76, both hemispheres 28.0
1990 Female, age 91, right hemisphere 27.9
2250 Female, age 67, right hemisphere 27.8
2532 Female, age 72, left hemisphere 26.7
2693 Female, age 94, both hemispheres 22.6
Perirhinal gyrus
nTPM: 29.4
1794 Male, age 80, right hemisphere 33.0
1847 Female, age 91, left hemisphere 32.7
2848 Male, age 76, right hemisphere 29.3
1841 Female, age 85, right hemisphere 26.6
2521 Female, age 94, right hemisphere 25.4
Subiculum
nTPM: 30.5
1901 Male, age 80, both hemispheres 34.1
2619 Male, age 74, both hemispheres 33.0
1977 Female, age 85, both hemispheres 32.1
2042 Male, age 76, both hemispheres 29.2
2438 Female, age 94, left hemisphere 27.9
2729 Female, age 91, right hemisphere 26.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.8
Samples: 197

Max nTPM: 81.8
Min nTPM: 27.3
Std nTPM: 8.0
Median nTPM: 44.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 81.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 71.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 69.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 67.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 64.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 64.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 61.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 58.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 56.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.5
FF:10153-102I9 76 years, female 16.4
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.6
Sample A Female 10.8
Sample B Female 8.8
Sample C Male 10.3
Sample D Male 7.6
Dorsal hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.7
Sample A Female 15.6
Sample B Female 15.1
Sample C Male 10.7
Sample D Male 11.6
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 10.4
Min nTPM: 7.9
Sample A Female 10.4
Sample B Female 7.9
Sample C Male 10.0
Sample D Male 9.0
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 17.2
Min nTPM: 8.3
Sample A Female 10.8
Sample B Female 8.3
Sample C Male 16.3
Sample D Male 17.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.6
Sample A Male 12.6
Sample B Male 12.0
Sample C Female 14.5
Sample D Female 11.6
Hippocampal formation
nTPM: 13.5
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.0
Sample A Male 11.0
Sample B Male 13.1
Sample C Female 13.8
Sample D Female 16.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
67979050 Antisense, RP_040923_02_C11, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org