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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
15.3
nTPM
Monaco:
35.1
nTPM
Schmiedel:
89.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.3
HPA sample
nTPM
gdT-cell nTPM: 11.5
Samples: 6
Max nTPM: 16.0
Min nTPM: 8.2
P10809_1007
9.7
P10809_1022
14.3
P10809_1041
8.2
P10809_1060
8.4
P10809_1077
12.2
P10809_1098
16.0
MAIT T-cell nTPM: 13.9
Samples: 6
Max nTPM: 20.1
Min nTPM: 7.2
P10809_1006
9.0
P10809_1024
7.2
P10809_1043
13.8
P10809_1062
14.7
P10809_1083
20.1
P10809_1097
18.5
Memory CD4 T-cell nTPM: 13.1
Samples: 6
Max nTPM: 14.7
Min nTPM: 11.2
P10809_1014
12.8
P10809_1026
14.7
P10809_1045
14.3
P10809_1064
13.9
P10809_1086
12.0
P10809_1113
11.2
Memory CD8 T-cell nTPM: 15.3
Samples: 5
Max nTPM: 22.9
Min nTPM: 10.0
P10809_1012
16.5
P10809_1027
10.0
P10809_1046
22.9
P10809_1065
14.0
P10809_1111
13.2
Naive CD4 T-cell nTPM: 13.8
Samples: 6
Max nTPM: 30.0
Min nTPM: 6.7
P10809_1015
10.4
P10809_1030
11.9
P10809_1049
30.0
P10809_1068
10.1
P10809_1085
6.7
P10809_1112
13.6
Naive CD8 T-cell nTPM: 11.2
Samples: 6
Max nTPM: 13.6
Min nTPM: 7.5
P10809_1016
10.8
P10809_1031
9.8
P10809_1050
7.5
P10809_1069
12.4
P10809_1087
12.9
P10809_1110
13.6
T-reg nTPM: 11.4
Samples: 6
Max nTPM: 14.9
Min nTPM: 7.5
P10809_1018
7.7
P10809_1037
14.9
P10809_1056
14.8
P10809_1075
10.9
P10809_1094
12.6
P10809_1106
7.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 24.0
Samples: 4
Max nTPM: 43.0
Min nTPM: 14.4
RHH5202_R3573
14.4
RHH5230_R3602
43.0
RHH5259_R3631
21.0
RHH5288_R3660
17.5
Effector memory CD8 T-cell nTPM: 35.2
Samples: 4
Max nTPM: 44.6
Min nTPM: 18.8
RHH5203_R3574
36.7
RHH5231_R3603
44.6
RHH5260_R3632
40.5
RHH5289_R3661
18.8
MAIT T-cell nTPM: 24.8
Samples: 4
Max nTPM: 35.6
Min nTPM: 6.2
RHH5233_R3605
6.2
RHH5205_R3576
35.6
RHH5262_R3634
33.6
RHH5297_R3663
23.9
Memory CD4 T-cell TFH nTPM: 21.2
Samples: 4
Max nTPM: 33.1
Min nTPM: 6.7
RHH5300_R3666
30.7
RHH5236_R3608
33.1
RHH5265_R3637
14.3
RHH5208_R3579
6.7
Memory CD4 T-cell Th1 nTPM: 31.8
Samples: 4
Max nTPM: 44.8
Min nTPM: 15.1
RHH5210_R3581
15.1
RHH5302_R3668
29.4
RHH5238_R3610
37.8
RHH5267_R3639
44.8
Memory CD4 T-cell Th1/Th17 nTPM: 28.6
Samples: 4
Max nTPM: 47.8
Min nTPM: 12.2
RHH5303_R3669
12.2
RHH5211_R3582
37.4
RHH5239_R3611
16.9
RHH5268_R3640
47.8
Memory CD4 T-cell Th17 nTPM: 25.7
Samples: 4
Max nTPM: 48.5
Min nTPM: 7.5
RHH5304_R3670
14.9
RHH5212_R3583
48.5
RHH5240_R3612
7.5
RHH5269_R3641
32.0
Memory CD4 T-cell Th2 nTPM: 33.4
Samples: 4
Max nTPM: 69.5
Min nTPM: 9.0
RHH5305_R3671
27.3
RHH5213_R3584
27.9
RHH5241_R3613
9.0
RHH5270_R3642
69.5
Naive CD4 T-cell nTPM: 25.8
Samples: 4
Max nTPM: 34.3
Min nTPM: 17.6
RHH5306_R3672
29.1
RHH5214_R3585
34.3
RHH5242_R3614
17.6
RHH5271_R3643
22.1
Naive CD8 T-cell nTPM: 21.2
Samples: 4
Max nTPM: 30.8
Min nTPM: 9.5
RHH5201_R3572
9.5
RHH5229_R3601
15.8
RHH5258_R3630
28.5
RHH5287_R3659
30.8
Non-Vd2 gdTCR nTPM: 31.6
Samples: 4
Max nTPM: 55.1
Min nTPM: 8.2
RHH5235_R3607
55.1
RHH5264_R3636
8.2
RHH5207_R3578
11.0
RHH5299_R3665
52.2
T-reg nTPM: 24.1
Samples: 4
Max nTPM: 37.4
Min nTPM: 13.0
RHH5301_R3667
37.4
RHH5237_R3609
13.0
RHH5266_R3638
24.0
RHH5209_R3580
21.8
Terminal effector memory CD4 T-cell nTPM: 12.6
Samples: 2
Max nTPM: 13.6
Min nTPM: 11.6
RHH5243_R3615
13.6
RHH5272_R3644
11.6
Terminal effector memory CD8 T-cell nTPM: 21.3
Samples: 4
Max nTPM: 27.7
Min nTPM: 13.1
RHH5232_R3604
27.6
RHH5204_R3575
13.1
RHH5261_R3633
27.7
RHH5296_R3662
16.8
Vd2 gdTCR nTPM: 25.3
Samples: 4
Max nTPM: 33.1
Min nTPM: 15.8
RHH5234_R3606
28.9
RHH5206_R3577
15.8
RHH5263_R3635
23.2
RHH5298_R3664
33.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
