HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:167.4 nTPM
HPA Brain:167.3 nTPM
GTEx:167.4 nTPM
FANTOM5:119.0 Scaled Tags Per Million
Pig:209.5 nTPM
Mouse:234.6 nTPM
Allen mouse:22.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030542
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 167.3
Sample id Sample description nTPM
Hippocampus
nTPM: 149.7
1898 Male, age 80, left hemisphere 185.5
2529 Female, age 94, left hemisphere 152.3
2148 Female, age 91, left hemisphere 145.1
1855 Male, age 76, left hemisphere 143.7
2621 Female, age 67, right hemisphere 143.1
1911 Female, age 85, right hemisphere 128.7
Dentate gyrus
nTPM: 141.7
2530 Female, age 94, left hemisphere 152.5
1927 Female, age 91, both hemispheres 149.2
2010 Male, age 76, both hemispheres 149.1
2528 Male, age 74, both hemispheres 143.9
2246 Female, age 85, both hemispheres 131.6
2531 Female, age 67, both hemispheres 123.9
Entorhinal gyrus
nTPM: 154.9
2764 Male, age 80, right hemisphere 172.5
1938 Female, age 85, left hemisphere 165.8
2117 Female, age 91, right hemisphere 161.8
1787 Male, age 76, left hemisphere 148.9
2686 Male, age 75, right hemisphere 145.2
2613 Female, age 94, left hemisphere 134.8
Hippocampus, CA1
nTPM: 155.7
2749 Male, age 80, left hemisphere 213.6
1873 Female, age 85, both hemispheres 153.9
2527 Male, age 74, both hemispheres 138.2
2082 Female, age 91, right hemisphere 137.3
2045 Male, age 76, both hemispheres 135.4
Hippocampus, CA2
nTPM: 151.4
1963 Male, age 80, left hemisphere 181.3
1892 Male, age 76, both hemispheres 174.5
2249 Male, age 74, both hemispheres 145.9
1940 Female, age 85, left hemisphere 141.0
2437 Female, age 94, left hemisphere 134.9
2113 Female, age 91, right hemisphere 130.8
Hippocampus, CA3
nTPM: 150.9
2137 Male, age 80, left hemisphere 183.6
1867 Male, age 76, both hemispheres 167.1
1891 Female, age 85, both hemispheres 148.8
2620 Female, age 94, left hemisphere 140.6
2436 Male, age 74, both hemispheres 134.8
2861 Female, age 67, both hemispheres 130.6
Parahippocampal cortex
nTPM: 140.5
1850 Male, age 80, both hemispheres 180.2
1990 Female, age 91, right hemisphere 155.5
1933 Female, age 85, both hemispheres 150.8
2532 Female, age 72, left hemisphere 138.1
2018 Male, age 76, both hemispheres 137.6
2250 Female, age 67, right hemisphere 133.1
2692 Male, age 74, both hemispheres 130.7
2693 Female, age 94, both hemispheres 129.2
2245 Female, age 91, both hemispheres 128.4
2622 Female, age 67, right hemisphere 121.9
Perirhinal gyrus
nTPM: 167.3
1794 Male, age 80, right hemisphere 188.7
1847 Female, age 91, left hemisphere 178.6
1841 Female, age 85, right hemisphere 173.1
2848 Male, age 76, right hemisphere 149.4
2521 Female, age 94, right hemisphere 146.8
Subiculum
nTPM: 142.6
1901 Male, age 80, both hemispheres 165.8
1977 Female, age 85, both hemispheres 163.2
2042 Male, age 76, both hemispheres 143.2
2619 Male, age 74, both hemispheres 131.8
2729 Female, age 91, right hemisphere 130.4
2438 Female, age 94, left hemisphere 121.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 167.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 167.4
Samples: 197

Max nTPM: 222.5
Min nTPM: 105.3
Std nTPM: 20.2
Median nTPM: 167.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 222.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 217.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 211.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 211.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 211.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 210.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 210.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 210.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 197.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 197.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 196.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.0
FF:10169-103B7 60 years, female 160.9
FF:10153-102I9 76 years, female 77.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 209.5
Pig sample Sample description nTPM
Subiculum
nTPM: 188.2
Samples: 4

Max nTPM: 235.2
Min nTPM: 163.0
Sample A Female 235.2
Sample B Female 181.2
Sample C Male 173.2
Sample D Male 163.0
Dorsal hippocampus
nTPM: 209.5
Samples: 4

Max nTPM: 257.2
Min nTPM: 170.7
Sample A Female 257.2
Sample B Female 202.0
Sample C Male 208.1
Sample D Male 170.7
Entorhinal cortex
nTPM: 188.9
Samples: 4

Max nTPM: 203.8
Min nTPM: 172.5
Sample A Female 184.5
Sample B Female 203.8
Sample C Male 194.8
Sample D Male 172.5
Ventral hippocampus
nTPM: 189.2
Samples: 4

Max nTPM: 218.8
Min nTPM: 150.3
Sample A Female 192.5
Sample B Female 150.3
Sample C Male 218.8
Sample D Male 195.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 234.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 232.3
Samples: 4

Max nTPM: 243.4
Min nTPM: 219.5
Sample A Male 232.1
Sample B Male 234.0
Sample C Female 219.5
Sample D Female 243.4
Hippocampal formation
nTPM: 234.6
Samples: 4

Max nTPM: 249.4
Min nTPM: 225.1
Sample A Male 225.1
Sample B Male 228.1
Sample C Female 249.4
Sample D Female 235.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.0
513227 Antisense, RP_040810_01_C03, Mouse strain C57BL/6J (56 days, male) 22.0

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