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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
195.2
nTPM
Monaco:
374.0
nTPM
Schmiedel:
403.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
195.2
HPA sample
nTPM
gdT-cell nTPM: 157.2
Samples: 6
Max nTPM: 192.2
Min nTPM: 113.5
P10809_1007
113.5
P10809_1022
192.2
P10809_1041
189.9
P10809_1060
148.1
P10809_1077
131.4
P10809_1098
168.3
MAIT T-cell nTPM: 164.8
Samples: 6
Max nTPM: 219.7
Min nTPM: 126.6
P10809_1006
126.6
P10809_1024
219.7
P10809_1043
157.5
P10809_1062
173.7
P10809_1083
151.8
P10809_1097
159.3
Memory CD4 T-cell nTPM: 161.9
Samples: 6
Max nTPM: 178.6
Min nTPM: 121.8
P10809_1014
121.8
P10809_1026
178.6
P10809_1045
169.0
P10809_1064
167.4
P10809_1086
162.0
P10809_1113
172.6
Memory CD8 T-cell nTPM: 158.3
Samples: 5
Max nTPM: 170.7
Min nTPM: 126.8
P10809_1012
126.8
P10809_1027
167.1
P10809_1046
170.7
P10809_1065
165.3
P10809_1111
161.5
Naive CD4 T-cell nTPM: 184.5
Samples: 6
Max nTPM: 217.4
Min nTPM: 127.2
P10809_1015
127.2
P10809_1030
178.7
P10809_1049
217.4
P10809_1068
189.1
P10809_1085
202.2
P10809_1112
192.2
Naive CD8 T-cell nTPM: 152.2
Samples: 6
Max nTPM: 172.3
Min nTPM: 117.5
P10809_1016
117.5
P10809_1031
151.6
P10809_1050
156.2
P10809_1069
165.0
P10809_1087
150.3
P10809_1110
172.3
T-reg nTPM: 195.2
Samples: 6
Max nTPM: 274.2
Min nTPM: 146.6
P10809_1018
146.6
P10809_1037
168.9
P10809_1056
274.2
P10809_1075
157.4
P10809_1094
215.3
P10809_1106
208.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
374.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 285.7
Samples: 4
Max nTPM: 315.8
Min nTPM: 265.9
RHH5202_R3573
315.8
RHH5230_R3602
265.9
RHH5259_R3631
285.8
RHH5288_R3660
275.1
Effector memory CD8 T-cell nTPM: 349.8
Samples: 4
Max nTPM: 417.5
Min nTPM: 300.0
RHH5203_R3574
417.5
RHH5231_R3603
300.0
RHH5260_R3632
319.5
RHH5289_R3661
362.0
MAIT T-cell nTPM: 300.1
Samples: 4
Max nTPM: 423.9
Min nTPM: 220.5
RHH5233_R3605
285.7
RHH5205_R3576
423.9
RHH5262_R3634
270.3
RHH5297_R3663
220.5
Memory CD4 T-cell TFH nTPM: 303.1
Samples: 4
Max nTPM: 361.5
Min nTPM: 261.7
RHH5300_R3666
261.7
RHH5236_R3608
318.2
RHH5265_R3637
271.0
RHH5208_R3579
361.5
Memory CD4 T-cell Th1 nTPM: 286.4
Samples: 4
Max nTPM: 304.4
Min nTPM: 272.6
RHH5210_R3581
304.4
RHH5302_R3668
288.1
RHH5238_R3610
280.4
RHH5267_R3639
272.6
Memory CD4 T-cell Th1/Th17 nTPM: 311.6
Samples: 4
Max nTPM: 335.5
Min nTPM: 279.1
RHH5303_R3669
335.5
RHH5211_R3582
307.3
RHH5239_R3611
324.6
RHH5268_R3640
279.1
Memory CD4 T-cell Th17 nTPM: 374.0
Samples: 4
Max nTPM: 429.3
Min nTPM: 303.4
RHH5304_R3670
359.6
RHH5212_R3583
403.7
RHH5240_R3612
429.3
RHH5269_R3641
303.4
Memory CD4 T-cell Th2 nTPM: 335.9
Samples: 4
Max nTPM: 409.0
Min nTPM: 302.0
RHH5305_R3671
324.4
RHH5213_R3584
409.0
RHH5241_R3613
302.0
RHH5270_R3642
308.1
Naive CD4 T-cell nTPM: 300.7
Samples: 4
Max nTPM: 358.0
Min nTPM: 239.2
RHH5306_R3672
296.6
RHH5214_R3585
358.0
RHH5242_R3614
239.2
RHH5271_R3643
309.1
Naive CD8 T-cell nTPM: 286.8
Samples: 4
Max nTPM: 344.3
Min nTPM: 250.1
RHH5201_R3572
344.3
RHH5229_R3601
250.1
RHH5258_R3630
299.1
RHH5287_R3659
253.5
Non-Vd2 gdTCR nTPM: 316.3
Samples: 4
Max nTPM: 397.7
Min nTPM: 273.4
RHH5235_R3607
304.9
RHH5264_R3636
273.4
RHH5207_R3578
397.7
RHH5299_R3665
289.2
T-reg nTPM: 329.1
Samples: 4
Max nTPM: 378.7
Min nTPM: 262.5
RHH5301_R3667
262.5
RHH5237_R3609
366.0
RHH5266_R3638
309.1
RHH5209_R3580
378.7
Terminal effector memory CD4 T-cell nTPM: 321.0
Samples: 2
Max nTPM: 346.5
Min nTPM: 295.4
RHH5243_R3615
346.5
RHH5272_R3644
295.4
Terminal effector memory CD8 T-cell nTPM: 297.7
Samples: 4
Max nTPM: 318.8
Min nTPM: 278.2
RHH5232_R3604
318.8
RHH5204_R3575
287.9
RHH5261_R3633
306.0
RHH5296_R3662
278.2
Vd2 gdTCR nTPM: 259.4
Samples: 4
Max nTPM: 307.8
Min nTPM: 208.9
RHH5234_R3606
237.4
RHH5206_R3577
307.8
RHH5263_R3635
283.4
RHH5298_R3664
208.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.