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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
482.0
nTPM
Monaco:
102.3
nTPM
Schmiedel:
217.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
482.0
HPA sample
nTPM
gdT-cell nTPM: 355.6
Samples: 6
Max nTPM: 395.7
Min nTPM: 277.4
P10809_1007
341.6
P10809_1022
358.7
P10809_1041
392.4
P10809_1060
277.4
P10809_1077
367.9
P10809_1098
395.7
MAIT T-cell nTPM: 482.0
Samples: 6
Max nTPM: 688.7
Min nTPM: 317.3
P10809_1006
317.3
P10809_1024
435.9
P10809_1043
542.5
P10809_1062
471.5
P10809_1083
436.2
P10809_1097
688.7
Memory CD4 T-cell nTPM: 390.6
Samples: 6
Max nTPM: 439.4
Min nTPM: 295.8
P10809_1014
295.8
P10809_1026
408.6
P10809_1045
397.3
P10809_1064
363.3
P10809_1086
439.4
P10809_1113
439.0
Memory CD8 T-cell nTPM: 360.5
Samples: 5
Max nTPM: 412.5
Min nTPM: 290.8
P10809_1012
290.8
P10809_1027
356.9
P10809_1046
403.3
P10809_1065
339.2
P10809_1111
412.5
Naive CD4 T-cell nTPM: 243.7
Samples: 6
Max nTPM: 282.6
Min nTPM: 177.9
P10809_1015
177.9
P10809_1030
248.7
P10809_1049
282.6
P10809_1068
242.7
P10809_1085
275.6
P10809_1112
234.7
Naive CD8 T-cell nTPM: 268.6
Samples: 6
Max nTPM: 357.4
Min nTPM: 205.4
P10809_1016
205.4
P10809_1031
263.6
P10809_1050
272.5
P10809_1069
291.6
P10809_1087
357.4
P10809_1110
221.3
T-reg nTPM: 389.2
Samples: 6
Max nTPM: 440.0
Min nTPM: 299.1
P10809_1018
299.1
P10809_1037
438.4
P10809_1056
440.0
P10809_1075
356.5
P10809_1094
368.8
P10809_1106
432.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.7
Samples: 4
Max nTPM: 94.9
Min nTPM: 26.2
RHH5202_R3573
26.2
RHH5230_R3602
59.8
RHH5259_R3631
94.9
RHH5288_R3660
57.8
Effector memory CD8 T-cell nTPM: 54.6
Samples: 4
Max nTPM: 73.2
Min nTPM: 38.6
RHH5203_R3574
62.6
RHH5231_R3603
38.6
RHH5260_R3632
73.2
RHH5289_R3661
43.8
MAIT T-cell nTPM: 86.7
Samples: 4
Max nTPM: 103.3
Min nTPM: 47.8
RHH5233_R3605
47.8
RHH5205_R3576
94.9
RHH5262_R3634
103.3
RHH5297_R3663
100.7
Memory CD4 T-cell TFH nTPM: 50.4
Samples: 4
Max nTPM: 62.6
Min nTPM: 42.6
RHH5300_R3666
62.6
RHH5236_R3608
49.2
RHH5265_R3637
42.6
RHH5208_R3579
47.2
Memory CD4 T-cell Th1 nTPM: 67.9
Samples: 4
Max nTPM: 97.2
Min nTPM: 26.7
RHH5210_R3581
26.7
RHH5302_R3668
71.9
RHH5238_R3610
97.2
RHH5267_R3639
75.6
Memory CD4 T-cell Th1/Th17 nTPM: 76.5
Samples: 4
Max nTPM: 91.1
Min nTPM: 65.1
RHH5303_R3669
70.7
RHH5211_R3582
65.1
RHH5239_R3611
79.1
RHH5268_R3640
91.1
Memory CD4 T-cell Th17 nTPM: 74.1
Samples: 4
Max nTPM: 96.6
Min nTPM: 60.4
RHH5304_R3670
96.6
RHH5212_R3583
61.1
RHH5240_R3612
78.4
RHH5269_R3641
60.4
Memory CD4 T-cell Th2 nTPM: 85.7
Samples: 4
Max nTPM: 90.2
Min nTPM: 74.4
RHH5305_R3671
87.9
RHH5213_R3584
90.2
RHH5241_R3613
74.4
RHH5270_R3642
90.1
Naive CD4 T-cell nTPM: 40.1
Samples: 4
Max nTPM: 55.8
Min nTPM: 20.1
RHH5306_R3672
55.8
RHH5214_R3585
48.6
RHH5242_R3614
20.1
RHH5271_R3643
35.9
Naive CD8 T-cell nTPM: 32.3
Samples: 4
Max nTPM: 39.2
Min nTPM: 21.5
RHH5201_R3572
34.6
RHH5229_R3601
34.0
RHH5258_R3630
21.5
RHH5287_R3659
39.2
Non-Vd2 gdTCR nTPM: 62.0
Samples: 4
Max nTPM: 76.3
Min nTPM: 48.7
RHH5235_R3607
76.3
RHH5264_R3636
68.5
RHH5207_R3578
48.7
RHH5299_R3665
54.4
T-reg nTPM: 65.4
Samples: 4
Max nTPM: 69.8
Min nTPM: 59.5
RHH5301_R3667
59.5
RHH5237_R3609
64.0
RHH5266_R3638
68.3
RHH5209_R3580
69.8
Terminal effector memory CD4 T-cell nTPM: 52.4
Samples: 2
Max nTPM: 53.9
Min nTPM: 50.8
RHH5243_R3615
53.9
RHH5272_R3644
50.8
Terminal effector memory CD8 T-cell nTPM: 78.9
Samples: 4
Max nTPM: 111.5
Min nTPM: 41.0
RHH5232_R3604
41.0
RHH5204_R3575
111.5
RHH5261_R3633
94.9
RHH5296_R3662
68.1
Vd2 gdTCR nTPM: 102.3
Samples: 4
Max nTPM: 151.5
Min nTPM: 59.4
RHH5234_R3606
59.4
RHH5206_R3577
151.5
RHH5263_R3635
89.5
RHH5298_R3664
108.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
