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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.2
nTPM
Monaco:
162.4
nTPM
Schmiedel:
469.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.2
HPA sample
nTPM
gdT-cell nTPM: 6.0
Samples: 6
Max nTPM: 11.0
Min nTPM: 2.3
P10809_1007
4.9
P10809_1022
4.9
P10809_1041
11.0
P10809_1060
6.9
P10809_1077
2.3
P10809_1098
5.8
MAIT T-cell nTPM: 19.8
Samples: 6
Max nTPM: 25.5
Min nTPM: 13.4
P10809_1006
25.5
P10809_1024
21.3
P10809_1043
17.0
P10809_1062
25.0
P10809_1083
16.7
P10809_1097
13.4
Memory CD4 T-cell nTPM: 23.8
Samples: 6
Max nTPM: 30.6
Min nTPM: 13.9
P10809_1014
23.6
P10809_1026
25.1
P10809_1045
30.2
P10809_1064
13.9
P10809_1086
19.2
P10809_1113
30.6
Memory CD8 T-cell nTPM: 14.0
Samples: 5
Max nTPM: 23.5
Min nTPM: 8.0
P10809_1012
23.5
P10809_1027
11.2
P10809_1046
13.2
P10809_1065
8.0
P10809_1111
14.3
Naive CD4 T-cell nTPM: 26.2
Samples: 6
Max nTPM: 37.5
Min nTPM: 19.5
P10809_1015
24.8
P10809_1030
28.9
P10809_1049
22.7
P10809_1068
37.5
P10809_1085
19.5
P10809_1112
23.9
Naive CD8 T-cell nTPM: 19.7
Samples: 6
Max nTPM: 32.9
Min nTPM: 4.9
P10809_1016
25.6
P10809_1031
32.9
P10809_1050
16.6
P10809_1069
14.2
P10809_1087
4.9
P10809_1110
24.1
T-reg nTPM: 9.9
Samples: 6
Max nTPM: 13.0
Min nTPM: 6.0
P10809_1018
8.8
P10809_1037
10.6
P10809_1056
6.0
P10809_1075
10.0
P10809_1094
13.0
P10809_1106
10.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
162.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.3
Samples: 4
Max nTPM: 168.8
Min nTPM: 125.4
RHH5202_R3573
168.8
RHH5230_R3602
136.7
RHH5259_R3631
154.1
RHH5288_R3660
125.4
Effector memory CD8 T-cell nTPM: 51.0
Samples: 4
Max nTPM: 60.8
Min nTPM: 34.0
RHH5203_R3574
60.8
RHH5231_R3603
34.0
RHH5260_R3632
59.9
RHH5289_R3661
49.1
MAIT T-cell nTPM: 123.8
Samples: 4
Max nTPM: 162.1
Min nTPM: 87.2
RHH5233_R3605
162.1
RHH5205_R3576
139.2
RHH5262_R3634
106.7
RHH5297_R3663
87.2
Memory CD4 T-cell TFH nTPM: 162.4
Samples: 4
Max nTPM: 178.2
Min nTPM: 155.0
RHH5300_R3666
157.3
RHH5236_R3608
155.0
RHH5265_R3637
159.2
RHH5208_R3579
178.2
Memory CD4 T-cell Th1 nTPM: 129.4
Samples: 4
Max nTPM: 144.4
Min nTPM: 115.5
RHH5210_R3581
141.1
RHH5302_R3668
116.4
RHH5238_R3610
115.5
RHH5267_R3639
144.4
Memory CD4 T-cell Th1/Th17 nTPM: 149.1
Samples: 4
Max nTPM: 201.5
Min nTPM: 111.7
RHH5303_R3669
139.2
RHH5211_R3582
111.7
RHH5239_R3611
201.5
RHH5268_R3640
143.9
Memory CD4 T-cell Th17 nTPM: 153.0
Samples: 4
Max nTPM: 198.7
Min nTPM: 135.3
RHH5304_R3670
141.4
RHH5212_R3583
135.3
RHH5240_R3612
198.7
RHH5269_R3641
136.7
Memory CD4 T-cell Th2 nTPM: 135.3
Samples: 4
Max nTPM: 174.3
Min nTPM: 112.8
RHH5305_R3671
130.5
RHH5213_R3584
123.5
RHH5241_R3613
174.3
RHH5270_R3642
112.8
Naive CD4 T-cell nTPM: 121.7
Samples: 4
Max nTPM: 132.2
Min nTPM: 109.0
RHH5306_R3672
128.7
RHH5214_R3585
109.0
RHH5242_R3614
116.8
RHH5271_R3643
132.2
Naive CD8 T-cell nTPM: 144.1
Samples: 4
Max nTPM: 152.5
Min nTPM: 127.1
RHH5201_R3572
152.5
RHH5229_R3601
145.1
RHH5258_R3630
151.5
RHH5287_R3659
127.1
Non-Vd2 gdTCR nTPM: 38.1
Samples: 4
Max nTPM: 52.8
Min nTPM: 22.3
RHH5235_R3607
37.5
RHH5264_R3636
52.8
RHH5207_R3578
39.8
RHH5299_R3665
22.3
T-reg nTPM: 108.1
Samples: 4
Max nTPM: 122.2
Min nTPM: 84.2
RHH5301_R3667
84.2
RHH5237_R3609
112.3
RHH5266_R3638
113.6
RHH5209_R3580
122.2
Terminal effector memory CD4 T-cell nTPM: 30.2
Samples: 2
Max nTPM: 43.8
Min nTPM: 16.6
RHH5243_R3615
16.6
RHH5272_R3644
43.8
Terminal effector memory CD8 T-cell nTPM: 27.8
Samples: 4
Max nTPM: 38.9
Min nTPM: 21.3
RHH5232_R3604
26.0
RHH5204_R3575
25.1
RHH5261_R3633
21.3
RHH5296_R3662
38.9
Vd2 gdTCR nTPM: 67.3
Samples: 4
Max nTPM: 99.9
Min nTPM: 32.2
RHH5234_R3606
99.9
RHH5206_R3577
32.2
RHH5263_R3635
76.1
RHH5298_R3664
61.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
