HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:411.6 nTPM
HPA Brain:172.9 nTPM
GTEx:411.6 nTPM
FANTOM5:441.6 Scaled Tags Per Million
Pig:87.2 nTPM
Mouse:186.8 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035642
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 172.9
Sample id Sample description nTPM
Hippocampus
nTPM: 172.9
2529 Female, age 94, left hemisphere 196.4
2621 Female, age 67, right hemisphere 196.0
1898 Male, age 80, left hemisphere 177.5
1855 Male, age 76, left hemisphere 163.5
2148 Female, age 91, left hemisphere 157.0
1911 Female, age 85, right hemisphere 146.8
Dentate gyrus
nTPM: 158.4
2530 Female, age 94, left hemisphere 191.5
2246 Female, age 85, both hemispheres 169.0
2531 Female, age 67, both hemispheres 167.8
2010 Male, age 76, both hemispheres 163.4
1927 Female, age 91, both hemispheres 141.1
2528 Male, age 74, both hemispheres 117.4
Entorhinal gyrus
nTPM: 157.8
2764 Male, age 80, right hemisphere 173.5
1787 Male, age 76, left hemisphere 171.8
1938 Female, age 85, left hemisphere 163.5
2686 Male, age 75, right hemisphere 152.5
2117 Female, age 91, right hemisphere 148.9
2613 Female, age 94, left hemisphere 136.9
Hippocampus, CA1
nTPM: 171.4
2749 Male, age 80, left hemisphere 219.1
2527 Male, age 74, both hemispheres 177.9
1873 Female, age 85, both hemispheres 165.9
2045 Male, age 76, both hemispheres 164.1
2082 Female, age 91, right hemisphere 129.9
Hippocampus, CA2
nTPM: 151.3
1892 Male, age 76, both hemispheres 169.6
1963 Male, age 80, left hemisphere 162.2
2437 Female, age 94, left hemisphere 156.5
1940 Female, age 85, left hemisphere 146.3
2113 Female, age 91, right hemisphere 139.6
2249 Male, age 74, both hemispheres 133.9
Hippocampus, CA3
nTPM: 159.3
2137 Male, age 80, left hemisphere 174.4
2861 Female, age 67, both hemispheres 165.6
1867 Male, age 76, both hemispheres 158.8
2436 Male, age 74, both hemispheres 155.0
2620 Female, age 94, left hemisphere 151.2
1891 Female, age 85, both hemispheres 150.6
Parahippocampal cortex
nTPM: 163.3
2245 Female, age 91, both hemispheres 218.3
2532 Female, age 72, left hemisphere 184.0
1850 Male, age 80, both hemispheres 176.4
1933 Female, age 85, both hemispheres 158.7
2250 Female, age 67, right hemisphere 156.4
2018 Male, age 76, both hemispheres 155.8
2692 Male, age 74, both hemispheres 154.2
1990 Female, age 91, right hemisphere 153.8
2622 Female, age 67, right hemisphere 151.9
2693 Female, age 94, both hemispheres 123.8
Perirhinal gyrus
nTPM: 172.7
1794 Male, age 80, right hemisphere 194.8
1847 Female, age 91, left hemisphere 184.5
1841 Female, age 85, right hemisphere 175.3
2848 Male, age 76, right hemisphere 158.9
2521 Female, age 94, right hemisphere 150.2
Subiculum
nTPM: 163.6
1901 Male, age 80, both hemispheres 186.5
2438 Female, age 94, left hemisphere 186.5
2042 Male, age 76, both hemispheres 179.7
1977 Female, age 85, both hemispheres 164.6
2619 Male, age 74, both hemispheres 156.1
2729 Female, age 91, right hemisphere 107.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 411.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 411.6
Samples: 197

Max nTPM: 895.0
Min nTPM: 199.1
Std nTPM: 101.5
Median nTPM: 397.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 895.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 806.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 770.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 749.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 684.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 633.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 631.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 631.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 630.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 604.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 567.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 441.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 441.6
FF:10169-103B7 60 years, female 550.4
FF:10153-102I9 76 years, female 332.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 87.2
Pig sample Sample description nTPM
Subiculum
nTPM: 73.4
Samples: 4

Max nTPM: 99.8
Min nTPM: 63.4
Sample A Female 99.8
Sample B Female 63.4
Sample C Male 65.9
Sample D Male 64.6
Dorsal hippocampus
nTPM: 87.2
Samples: 4

Max nTPM: 119.9
Min nTPM: 71.1
Sample A Female 119.9
Sample B Female 73.0
Sample C Male 84.9
Sample D Male 71.1
Entorhinal cortex
nTPM: 75.0
Samples: 4

Max nTPM: 78.3
Min nTPM: 72.6
Sample A Female 78.3
Sample B Female 72.6
Sample C Male 74.7
Sample D Male 74.4
Ventral hippocampus
nTPM: 82.9
Samples: 4

Max nTPM: 99.5
Min nTPM: 56.5
Sample A Female 88.6
Sample B Female 56.5
Sample C Male 99.5
Sample D Male 86.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 186.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 183.3
Samples: 4

Max nTPM: 189.5
Min nTPM: 176.7
Sample A Male 176.7
Sample B Male 189.4
Sample C Female 177.5
Sample D Female 189.5
Hippocampal formation
nTPM: 186.8
Samples: 4

Max nTPM: 218.4
Min nTPM: 164.8
Sample A Male 191.0
Sample B Male 173.0
Sample C Female 164.8
Sample D Female 218.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68117986 Antisense, RP_040929_01_H04, Mouse strain C57BL/6J (56 days, male) 9.5

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