We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
472.4
nTPM
Monaco:
192.5
nTPM
Schmiedel:
416.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
472.4
HPA sample
nTPM
gdT-cell nTPM: 352.6
Samples: 6
Max nTPM: 503.9
Min nTPM: 285.6
P10809_1007
298.5
P10809_1022
368.1
P10809_1041
503.9
P10809_1060
315.6
P10809_1077
285.6
P10809_1098
343.8
MAIT T-cell nTPM: 389.6
Samples: 6
Max nTPM: 492.0
Min nTPM: 318.4
P10809_1006
331.0
P10809_1024
390.9
P10809_1043
438.0
P10809_1062
367.4
P10809_1083
318.4
P10809_1097
492.0
Memory CD4 T-cell nTPM: 374.8
Samples: 6
Max nTPM: 515.3
Min nTPM: 292.0
P10809_1014
306.4
P10809_1026
515.3
P10809_1045
408.3
P10809_1064
354.4
P10809_1086
292.0
P10809_1113
372.5
Memory CD8 T-cell nTPM: 365.1
Samples: 5
Max nTPM: 437.4
Min nTPM: 295.3
P10809_1012
295.3
P10809_1027
375.2
P10809_1046
437.4
P10809_1065
362.0
P10809_1111
355.5
Naive CD4 T-cell nTPM: 329.9
Samples: 6
Max nTPM: 443.3
Min nTPM: 272.5
P10809_1015
272.5
P10809_1030
362.5
P10809_1049
443.3
P10809_1068
296.4
P10809_1085
278.8
P10809_1112
326.1
Naive CD8 T-cell nTPM: 344.9
Samples: 6
Max nTPM: 497.7
Min nTPM: 255.6
P10809_1016
334.4
P10809_1031
497.7
P10809_1050
339.4
P10809_1069
330.3
P10809_1087
255.6
P10809_1110
312.2
T-reg nTPM: 472.5
Samples: 6
Max nTPM: 729.3
Min nTPM: 296.3
P10809_1018
296.3
P10809_1037
430.7
P10809_1056
729.3
P10809_1075
420.4
P10809_1094
474.6
P10809_1106
483.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
192.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 132.0
Samples: 4
Max nTPM: 169.2
Min nTPM: 89.5
RHH5202_R3573
89.5
RHH5230_R3602
147.9
RHH5259_R3631
121.2
RHH5288_R3660
169.2
Effector memory CD8 T-cell nTPM: 100.6
Samples: 4
Max nTPM: 105.3
Min nTPM: 95.2
RHH5203_R3574
103.2
RHH5231_R3603
105.3
RHH5260_R3632
98.6
RHH5289_R3661
95.2
MAIT T-cell nTPM: 166.8
Samples: 4
Max nTPM: 187.5
Min nTPM: 152.9
RHH5233_R3605
170.8
RHH5205_R3576
156.1
RHH5262_R3634
152.9
RHH5297_R3663
187.5
Memory CD4 T-cell TFH nTPM: 126.1
Samples: 4
Max nTPM: 171.6
Min nTPM: 100.4
RHH5300_R3666
119.4
RHH5236_R3608
171.6
RHH5265_R3637
100.4
RHH5208_R3579
112.9
Memory CD4 T-cell Th1 nTPM: 151.4
Samples: 4
Max nTPM: 198.0
Min nTPM: 101.8
RHH5210_R3581
101.8
RHH5302_R3668
198.0
RHH5238_R3610
174.2
RHH5267_R3639
131.7
Memory CD4 T-cell Th1/Th17 nTPM: 134.0
Samples: 4
Max nTPM: 158.3
Min nTPM: 91.6
RHH5303_R3669
158.3
RHH5211_R3582
150.0
RHH5239_R3611
91.6
RHH5268_R3640
136.2
Memory CD4 T-cell Th17 nTPM: 110.0
Samples: 4
Max nTPM: 139.4
Min nTPM: 75.2
RHH5304_R3670
139.4
RHH5212_R3583
138.2
RHH5240_R3612
75.2
RHH5269_R3641
87.1
Memory CD4 T-cell Th2 nTPM: 137.8
Samples: 4
Max nTPM: 158.7
Min nTPM: 111.3
RHH5305_R3671
158.7
RHH5213_R3584
127.5
RHH5241_R3613
153.6
RHH5270_R3642
111.3
Naive CD4 T-cell nTPM: 128.7
Samples: 4
Max nTPM: 152.5
Min nTPM: 108.4
RHH5306_R3672
141.9
RHH5214_R3585
152.5
RHH5242_R3614
112.1
RHH5271_R3643
108.4
Naive CD8 T-cell nTPM: 117.3
Samples: 4
Max nTPM: 146.1
Min nTPM: 97.7
RHH5201_R3572
120.0
RHH5229_R3601
105.2
RHH5258_R3630
97.7
RHH5287_R3659
146.1
Non-Vd2 gdTCR nTPM: 147.2
Samples: 4
Max nTPM: 192.3
Min nTPM: 122.5
RHH5235_R3607
129.3
RHH5264_R3636
144.7
RHH5207_R3578
122.5
RHH5299_R3665
192.3
T-reg nTPM: 133.7
Samples: 4
Max nTPM: 167.3
Min nTPM: 109.4
RHH5301_R3667
167.3
RHH5237_R3609
127.1
RHH5266_R3638
109.4
RHH5209_R3580
130.9
Terminal effector memory CD4 T-cell nTPM: 119.2
Samples: 2
Max nTPM: 132.5
Min nTPM: 105.8
RHH5243_R3615
105.8
RHH5272_R3644
132.5
Terminal effector memory CD8 T-cell nTPM: 192.5
Samples: 4
Max nTPM: 298.4
Min nTPM: 128.7
RHH5232_R3604
128.7
RHH5204_R3575
298.4
RHH5261_R3633
141.8
RHH5296_R3662
201.1
Vd2 gdTCR nTPM: 177.2
Samples: 4
Max nTPM: 235.0
Min nTPM: 121.3
RHH5234_R3606
121.3
RHH5206_R3577
235.0
RHH5263_R3635
138.7
RHH5298_R3664
213.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
