HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:29.6 nTPM
HPA Brain:67.6 nTPM
GTEx:29.6 nTPM
FANTOM5:29.9 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:48.7 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006426
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.6
Sample id Sample description nTPM
Hippocampus
nTPM: 67.6
2621 Female, age 67, right hemisphere 74.4
2148 Female, age 91, left hemisphere 71.3
2529 Female, age 94, left hemisphere 68.3
1855 Male, age 76, left hemisphere 66.1
1911 Female, age 85, right hemisphere 63.2
1898 Male, age 80, left hemisphere 62.1
Dentate gyrus
nTPM: 64.1
2010 Male, age 76, both hemispheres 73.2
2530 Female, age 94, left hemisphere 68.6
1927 Female, age 91, both hemispheres 66.0
2531 Female, age 67, both hemispheres 65.6
2246 Female, age 85, both hemispheres 57.3
2528 Male, age 74, both hemispheres 54.2
Entorhinal gyrus
nTPM: 60.9
1938 Female, age 85, left hemisphere 64.9
2613 Female, age 94, left hemisphere 64.7
2117 Female, age 91, right hemisphere 62.2
2764 Male, age 80, right hemisphere 61.1
1787 Male, age 76, left hemisphere 58.0
2686 Male, age 75, right hemisphere 54.4
Hippocampus, CA1
nTPM: 63.3
1873 Female, age 85, both hemispheres 69.2
2749 Male, age 80, left hemisphere 68.6
2527 Male, age 74, both hemispheres 61.2
2082 Female, age 91, right hemisphere 58.9
2045 Male, age 76, both hemispheres 58.8
Hippocampus, CA2
nTPM: 64.7
1963 Male, age 80, left hemisphere 81.6
1940 Female, age 85, left hemisphere 69.6
1892 Male, age 76, both hemispheres 62.3
2437 Female, age 94, left hemisphere 61.5
2113 Female, age 91, right hemisphere 58.1
2249 Male, age 74, both hemispheres 55.2
Hippocampus, CA3
nTPM: 67.6
2861 Female, age 67, both hemispheres 78.4
1867 Male, age 76, both hemispheres 74.7
2137 Male, age 80, left hemisphere 70.7
2436 Male, age 74, both hemispheres 63.4
1891 Female, age 85, both hemispheres 61.5
2620 Female, age 94, left hemisphere 56.9
Parahippocampal cortex
nTPM: 57.4
2018 Male, age 76, both hemispheres 72.8
2622 Female, age 67, right hemisphere 60.9
2245 Female, age 91, both hemispheres 60.6
1933 Female, age 85, both hemispheres 59.5
1850 Male, age 80, both hemispheres 57.7
1990 Female, age 91, right hemisphere 54.4
2250 Female, age 67, right hemisphere 52.8
2692 Male, age 74, both hemispheres 52.3
2532 Female, age 72, left hemisphere 52.0
2693 Female, age 94, both hemispheres 51.1
Perirhinal gyrus
nTPM: 55.8
1847 Female, age 91, left hemisphere 62.8
1794 Male, age 80, right hemisphere 60.7
1841 Female, age 85, right hemisphere 58.2
2521 Female, age 94, right hemisphere 50.9
2848 Male, age 76, right hemisphere 46.2
Subiculum
nTPM: 62.5
2042 Male, age 76, both hemispheres 71.6
2729 Female, age 91, right hemisphere 67.6
1901 Male, age 80, both hemispheres 59.7
2438 Female, age 94, left hemisphere 58.8
1977 Female, age 85, both hemispheres 58.7
2619 Male, age 74, both hemispheres 58.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 68.9
Min nTPM: 12.8
Std nTPM: 9.5
Median nTPM: 27.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 68.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 57.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 56.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 55.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 53.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 53.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 52.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 51.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 50.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 47.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 47.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.9
FF:10153-102I9 76 years, female 37.0
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.0
Pig sample Sample description nTPM
Subiculum
nTPM: 24.8
Samples: 4

Max nTPM: 31.2
Min nTPM: 21.5
Sample A Female 31.2
Sample B Female 23.1
Sample C Male 23.5
Sample D Male 21.5
Dorsal hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 29.6
Min nTPM: 22.0
Sample A Female 29.6
Sample B Female 27.7
Sample C Male 22.0
Sample D Male 22.6
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 31.2
Min nTPM: 23.9
Sample A Female 28.3
Sample B Female 24.5
Sample C Male 31.2
Sample D Male 23.9
Ventral hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 32.0
Min nTPM: 20.0
Sample A Female 20.8
Sample B Female 20.0
Sample C Male 32.0
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.7
Samples: 4

Max nTPM: 50.5
Min nTPM: 45.9
Sample A Male 50.5
Sample B Male 48.8
Sample C Female 45.9
Sample D Female 49.5
Hippocampal formation
nTPM: 39.4
Samples: 4

Max nTPM: 41.7
Min nTPM: 37.6
Sample A Male 39.0
Sample B Male 39.3
Sample C Female 41.7
Sample D Female 37.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69817946 Antisense, RP_050510_04_A12, Mouse strain C57BL/6J (56 days, male) 4.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org