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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.4
nTPM
Monaco:
236.3
nTPM
Schmiedel:
300.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.4
HPA sample
nTPM
gdT-cell nTPM: 25.0
Samples: 6
Max nTPM: 34.2
Min nTPM: 16.1
P10809_1007
29.4
P10809_1022
20.8
P10809_1041
34.2
P10809_1060
16.1
P10809_1077
21.9
P10809_1098
27.5
MAIT T-cell nTPM: 32.5
Samples: 6
Max nTPM: 41.5
Min nTPM: 21.9
P10809_1006
41.5
P10809_1024
22.3
P10809_1043
38.3
P10809_1062
21.9
P10809_1083
37.0
P10809_1097
33.8
Memory CD4 T-cell nTPM: 41.5
Samples: 6
Max nTPM: 61.0
Min nTPM: 21.1
P10809_1014
61.0
P10809_1026
42.7
P10809_1045
59.6
P10809_1064
43.5
P10809_1086
21.2
P10809_1113
21.1
Memory CD8 T-cell nTPM: 34.4
Samples: 5
Max nTPM: 59.1
Min nTPM: 18.9
P10809_1012
59.1
P10809_1027
18.9
P10809_1046
37.2
P10809_1065
29.4
P10809_1111
27.2
Naive CD4 T-cell nTPM: 24.6
Samples: 6
Max nTPM: 33.7
Min nTPM: 17.6
P10809_1015
25.8
P10809_1030
25.5
P10809_1049
33.7
P10809_1068
18.1
P10809_1085
26.9
P10809_1112
17.6
Naive CD8 T-cell nTPM: 23.7
Samples: 6
Max nTPM: 36.8
Min nTPM: 16.6
P10809_1016
16.6
P10809_1031
36.8
P10809_1050
20.6
P10809_1069
27.3
P10809_1087
16.6
P10809_1110
24.2
T-reg nTPM: 51.4
Samples: 6
Max nTPM: 117.2
Min nTPM: 30.4
P10809_1018
35.2
P10809_1037
41.8
P10809_1056
117.2
P10809_1075
35.9
P10809_1094
30.4
P10809_1106
47.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
236.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.2
Samples: 4
Max nTPM: 185.9
Min nTPM: 42.6
RHH5202_R3573
42.6
RHH5230_R3602
185.9
RHH5259_R3631
136.1
RHH5288_R3660
60.0
Effector memory CD8 T-cell nTPM: 111.6
Samples: 4
Max nTPM: 201.0
Min nTPM: 42.1
RHH5203_R3574
56.2
RHH5231_R3603
147.0
RHH5260_R3632
201.0
RHH5289_R3661
42.1
MAIT T-cell nTPM: 83.9
Samples: 4
Max nTPM: 142.2
Min nTPM: 61.7
RHH5233_R3605
63.0
RHH5205_R3576
68.5
RHH5262_R3634
142.2
RHH5297_R3663
61.7
Memory CD4 T-cell TFH nTPM: 77.1
Samples: 4
Max nTPM: 140.7
Min nTPM: 34.6
RHH5300_R3666
72.5
RHH5236_R3608
140.7
RHH5265_R3637
60.7
RHH5208_R3579
34.6
Memory CD4 T-cell Th1 nTPM: 112.9
Samples: 4
Max nTPM: 179.3
Min nTPM: 39.2
RHH5210_R3581
54.5
RHH5302_R3668
39.2
RHH5238_R3610
179.3
RHH5267_R3639
178.6
Memory CD4 T-cell Th1/Th17 nTPM: 138.0
Samples: 4
Max nTPM: 198.9
Min nTPM: 53.6
RHH5303_R3669
53.6
RHH5211_R3582
173.5
RHH5239_R3611
125.9
RHH5268_R3640
198.9
Memory CD4 T-cell Th17 nTPM: 140.8
Samples: 4
Max nTPM: 211.4
Min nTPM: 59.4
RHH5304_R3670
59.4
RHH5212_R3583
211.4
RHH5240_R3612
91.5
RHH5269_R3641
200.7
Memory CD4 T-cell Th2 nTPM: 236.4
Samples: 4
Max nTPM: 380.3
Min nTPM: 77.5
RHH5305_R3671
123.6
RHH5213_R3584
380.3
RHH5241_R3613
77.5
RHH5270_R3642
364.0
Naive CD4 T-cell nTPM: 64.1
Samples: 4
Max nTPM: 83.9
Min nTPM: 35.7
RHH5306_R3672
64.3
RHH5214_R3585
83.9
RHH5242_R3614
35.7
RHH5271_R3643
72.6
Naive CD8 T-cell nTPM: 45.0
Samples: 4
Max nTPM: 76.2
Min nTPM: 27.1
RHH5201_R3572
27.1
RHH5229_R3601
76.2
RHH5258_R3630
46.5
RHH5287_R3659
30.3
Non-Vd2 gdTCR nTPM: 66.2
Samples: 4
Max nTPM: 103.1
Min nTPM: 45.4
RHH5235_R3607
103.1
RHH5264_R3636
49.5
RHH5207_R3578
45.4
RHH5299_R3665
66.7
T-reg nTPM: 151.4
Samples: 4
Max nTPM: 223.3
Min nTPM: 82.5
RHH5301_R3667
82.5
RHH5237_R3609
223.3
RHH5266_R3638
157.3
RHH5209_R3580
142.3
Terminal effector memory CD4 T-cell nTPM: 77.7
Samples: 2
Max nTPM: 108.2
Min nTPM: 47.1
RHH5243_R3615
108.2
RHH5272_R3644
47.1
Terminal effector memory CD8 T-cell nTPM: 66.7
Samples: 4
Max nTPM: 136.1
Min nTPM: 39.0
RHH5232_R3604
48.8
RHH5204_R3575
42.7
RHH5261_R3633
136.1
RHH5296_R3662
39.0
Vd2 gdTCR nTPM: 86.8
Samples: 4
Max nTPM: 102.5
Min nTPM: 63.0
RHH5234_R3606
101.6
RHH5206_R3577
63.0
RHH5263_R3635
102.5
RHH5298_R3664
80.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
