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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
99.6
nTPM
Monaco:
193.4
nTPM
Schmiedel:
263.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.6
HPA sample
nTPM
gdT-cell nTPM: 75.6
Samples: 6
Max nTPM: 85.3
Min nTPM: 68.6
P10809_1007
68.6
P10809_1022
85.3
P10809_1041
73.7
P10809_1060
69.9
P10809_1077
75.1
P10809_1098
80.7
MAIT T-cell nTPM: 99.6
Samples: 6
Max nTPM: 116.0
Min nTPM: 83.7
P10809_1006
90.6
P10809_1024
96.0
P10809_1043
105.8
P10809_1062
116.0
P10809_1083
83.7
P10809_1097
105.5
Memory CD4 T-cell nTPM: 75.4
Samples: 6
Max nTPM: 84.6
Min nTPM: 66.9
P10809_1014
71.0
P10809_1026
82.1
P10809_1045
80.4
P10809_1064
67.3
P10809_1086
66.9
P10809_1113
84.6
Memory CD8 T-cell nTPM: 71.6
Samples: 5
Max nTPM: 92.0
Min nTPM: 54.6
P10809_1012
71.4
P10809_1027
54.6
P10809_1046
92.0
P10809_1065
67.4
P10809_1111
72.7
Naive CD4 T-cell nTPM: 68.7
Samples: 6
Max nTPM: 79.9
Min nTPM: 57.8
P10809_1015
57.8
P10809_1030
63.9
P10809_1049
67.4
P10809_1068
79.9
P10809_1085
64.4
P10809_1112
79.0
Naive CD8 T-cell nTPM: 69.4
Samples: 6
Max nTPM: 86.0
Min nTPM: 59.5
P10809_1016
72.2
P10809_1031
59.5
P10809_1050
66.8
P10809_1069
67.9
P10809_1087
64.0
P10809_1110
86.0
T-reg nTPM: 83.1
Samples: 6
Max nTPM: 96.6
Min nTPM: 65.0
P10809_1018
73.3
P10809_1037
65.0
P10809_1056
94.1
P10809_1075
92.6
P10809_1094
96.6
P10809_1106
76.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.6
Samples: 4
Max nTPM: 150.6
Min nTPM: 138.0
RHH5202_R3573
150.6
RHH5230_R3602
149.8
RHH5259_R3631
138.0
RHH5288_R3660
147.9
Effector memory CD8 T-cell nTPM: 153.1
Samples: 4
Max nTPM: 174.9
Min nTPM: 135.1
RHH5203_R3574
144.1
RHH5231_R3603
158.1
RHH5260_R3632
135.1
RHH5289_R3661
174.9
MAIT T-cell nTPM: 193.4
Samples: 4
Max nTPM: 225.5
Min nTPM: 178.0
RHH5233_R3605
188.4
RHH5205_R3576
225.5
RHH5262_R3634
181.7
RHH5297_R3663
178.0
Memory CD4 T-cell TFH nTPM: 154.0
Samples: 4
Max nTPM: 157.5
Min nTPM: 147.2
RHH5300_R3666
157.5
RHH5236_R3608
155.9
RHH5265_R3637
155.5
RHH5208_R3579
147.2
Memory CD4 T-cell Th1 nTPM: 138.6
Samples: 4
Max nTPM: 154.9
Min nTPM: 126.8
RHH5210_R3581
140.3
RHH5302_R3668
154.9
RHH5238_R3610
126.8
RHH5267_R3639
132.5
Memory CD4 T-cell Th1/Th17 nTPM: 175.9
Samples: 4
Max nTPM: 220.0
Min nTPM: 143.1
RHH5303_R3669
220.0
RHH5211_R3582
188.8
RHH5239_R3611
151.7
RHH5268_R3640
143.1
Memory CD4 T-cell Th17 nTPM: 188.9
Samples: 4
Max nTPM: 231.1
Min nTPM: 148.1
RHH5304_R3670
231.1
RHH5212_R3583
163.9
RHH5240_R3612
212.4
RHH5269_R3641
148.1
Memory CD4 T-cell Th2 nTPM: 143.3
Samples: 4
Max nTPM: 158.5
Min nTPM: 127.0
RHH5305_R3671
158.5
RHH5213_R3584
146.1
RHH5241_R3613
127.0
RHH5270_R3642
141.4
Naive CD4 T-cell nTPM: 130.3
Samples: 4
Max nTPM: 145.0
Min nTPM: 118.9
RHH5306_R3672
145.0
RHH5214_R3585
124.8
RHH5242_R3614
118.9
RHH5271_R3643
132.5
Naive CD8 T-cell nTPM: 147.1
Samples: 4
Max nTPM: 174.2
Min nTPM: 122.7
RHH5201_R3572
142.1
RHH5229_R3601
122.7
RHH5258_R3630
149.2
RHH5287_R3659
174.2
Non-Vd2 gdTCR nTPM: 115.9
Samples: 4
Max nTPM: 125.4
Min nTPM: 109.0
RHH5235_R3607
119.0
RHH5264_R3636
125.4
RHH5207_R3578
109.0
RHH5299_R3665
110.3
T-reg nTPM: 145.5
Samples: 4
Max nTPM: 165.6
Min nTPM: 130.9
RHH5301_R3667
147.1
RHH5237_R3609
165.6
RHH5266_R3638
130.9
RHH5209_R3580
138.2
Terminal effector memory CD4 T-cell nTPM: 156.4
Samples: 2
Max nTPM: 190.2
Min nTPM: 122.6
RHH5243_R3615
190.2
RHH5272_R3644
122.6
Terminal effector memory CD8 T-cell nTPM: 146.5
Samples: 4
Max nTPM: 162.7
Min nTPM: 105.7
RHH5232_R3604
158.0
RHH5204_R3575
105.7
RHH5261_R3633
159.7
RHH5296_R3662
162.7
Vd2 gdTCR nTPM: 148.3
Samples: 4
Max nTPM: 179.3
Min nTPM: 133.0
RHH5234_R3606
135.1
RHH5206_R3577
179.3
RHH5263_R3635
145.8
RHH5298_R3664
133.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
