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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.8
nTPM
Monaco:
170.6
nTPM
Schmiedel:
148.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.8
HPA sample
nTPM
gdT-cell nTPM: 19.5
Samples: 6
Max nTPM: 31.6
Min nTPM: 8.0
P10809_1007
31.6
P10809_1022
17.3
P10809_1041
8.0
P10809_1060
14.5
P10809_1077
27.2
P10809_1098
18.3
MAIT T-cell nTPM: 19.8
Samples: 6
Max nTPM: 28.4
Min nTPM: 9.5
P10809_1006
28.4
P10809_1024
21.8
P10809_1043
13.1
P10809_1062
9.5
P10809_1083
22.0
P10809_1097
24.1
Memory CD4 T-cell nTPM: 14.4
Samples: 6
Max nTPM: 19.3
Min nTPM: 6.9
P10809_1014
19.3
P10809_1026
6.9
P10809_1045
14.3
P10809_1064
16.9
P10809_1086
19.0
P10809_1113
9.8
Memory CD8 T-cell nTPM: 18.2
Samples: 5
Max nTPM: 24.3
Min nTPM: 12.5
P10809_1012
24.3
P10809_1027
13.3
P10809_1046
18.6
P10809_1065
12.5
P10809_1111
22.1
Naive CD4 T-cell nTPM: 12.8
Samples: 6
Max nTPM: 18.8
Min nTPM: 7.2
P10809_1015
18.8
P10809_1030
7.2
P10809_1049
15.1
P10809_1068
8.5
P10809_1085
17.7
P10809_1112
9.6
Naive CD8 T-cell nTPM: 13.9
Samples: 6
Max nTPM: 18.7
Min nTPM: 10.5
P10809_1016
15.8
P10809_1031
15.5
P10809_1050
11.7
P10809_1069
10.9
P10809_1087
18.7
P10809_1110
10.5
T-reg nTPM: 9.7
Samples: 6
Max nTPM: 12.3
Min nTPM: 3.8
P10809_1018
10.8
P10809_1037
11.5
P10809_1056
3.8
P10809_1075
12.3
P10809_1094
9.7
P10809_1106
9.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
170.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 167.2
Samples: 4
Max nTPM: 196.1
Min nTPM: 144.6
RHH5202_R3573
161.1
RHH5230_R3602
196.1
RHH5259_R3631
167.0
RHH5288_R3660
144.6
Effector memory CD8 T-cell nTPM: 147.3
Samples: 4
Max nTPM: 186.8
Min nTPM: 114.8
RHH5203_R3574
162.5
RHH5231_R3603
114.8
RHH5260_R3632
125.0
RHH5289_R3661
186.8
MAIT T-cell nTPM: 136.3
Samples: 4
Max nTPM: 157.7
Min nTPM: 100.2
RHH5233_R3605
157.7
RHH5205_R3576
156.4
RHH5262_R3634
130.7
RHH5297_R3663
100.2
Memory CD4 T-cell TFH nTPM: 115.1
Samples: 4
Max nTPM: 138.2
Min nTPM: 77.4
RHH5300_R3666
128.8
RHH5236_R3608
138.2
RHH5265_R3637
77.4
RHH5208_R3579
116.0
Memory CD4 T-cell Th1 nTPM: 127.4
Samples: 4
Max nTPM: 164.8
Min nTPM: 103.3
RHH5210_R3581
120.0
RHH5302_R3668
103.3
RHH5238_R3610
164.8
RHH5267_R3639
121.6
Memory CD4 T-cell Th1/Th17 nTPM: 136.5
Samples: 4
Max nTPM: 160.2
Min nTPM: 109.7
RHH5303_R3669
117.7
RHH5211_R3582
109.7
RHH5239_R3611
160.2
RHH5268_R3640
158.3
Memory CD4 T-cell Th17 nTPM: 151.8
Samples: 4
Max nTPM: 168.1
Min nTPM: 122.7
RHH5304_R3670
122.7
RHH5212_R3583
158.3
RHH5240_R3612
158.0
RHH5269_R3641
168.1
Memory CD4 T-cell Th2 nTPM: 121.6
Samples: 4
Max nTPM: 135.3
Min nTPM: 108.5
RHH5305_R3671
108.5
RHH5213_R3584
135.3
RHH5241_R3613
129.7
RHH5270_R3642
113.0
Naive CD4 T-cell nTPM: 97.4
Samples: 4
Max nTPM: 106.8
Min nTPM: 82.9
RHH5306_R3672
96.4
RHH5214_R3585
103.3
RHH5242_R3614
106.8
RHH5271_R3643
82.9
Naive CD8 T-cell nTPM: 111.1
Samples: 4
Max nTPM: 155.7
Min nTPM: 56.2
RHH5201_R3572
56.2
RHH5229_R3601
153.2
RHH5258_R3630
79.3
RHH5287_R3659
155.7
Non-Vd2 gdTCR nTPM: 170.6
Samples: 4
Max nTPM: 257.2
Min nTPM: 82.0
RHH5235_R3607
257.2
RHH5264_R3636
82.0
RHH5207_R3578
184.0
RHH5299_R3665
159.2
T-reg nTPM: 99.8
Samples: 4
Max nTPM: 123.1
Min nTPM: 67.4
RHH5301_R3667
90.4
RHH5237_R3609
123.1
RHH5266_R3638
67.4
RHH5209_R3580
118.3
Terminal effector memory CD4 T-cell nTPM: 148.6
Samples: 2
Max nTPM: 199.4
Min nTPM: 97.7
RHH5243_R3615
199.4
RHH5272_R3644
97.7
Terminal effector memory CD8 T-cell nTPM: 154.8
Samples: 4
Max nTPM: 171.2
Min nTPM: 131.8
RHH5232_R3604
171.2
RHH5204_R3575
166.5
RHH5261_R3633
149.5
RHH5296_R3662
131.8
Vd2 gdTCR nTPM: 140.9
Samples: 4
Max nTPM: 184.0
Min nTPM: 94.0
RHH5234_R3606
184.0
RHH5206_R3577
142.6
RHH5263_R3635
94.0
RHH5298_R3664
143.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
