HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.6 nTPM
HPA Brain:45.8 nTPM
GTEx:13.6 nTPM
FANTOM5:83.3 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:11.9 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037759Antibody HPA037760
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.8
Sample id Sample description nTPM
Hippocampus
nTPM: 41.8
1855 Male, age 76, left hemisphere 48.6
2621 Female, age 67, right hemisphere 45.1
1898 Male, age 80, left hemisphere 43.1
2148 Female, age 91, left hemisphere 40.2
1911 Female, age 85, right hemisphere 38.2
2529 Female, age 94, left hemisphere 35.6
Dentate gyrus
nTPM: 38.2
1927 Female, age 91, both hemispheres 46.4
2530 Female, age 94, left hemisphere 41.7
2010 Male, age 76, both hemispheres 39.4
2246 Female, age 85, both hemispheres 36.2
2531 Female, age 67, both hemispheres 35.4
2528 Male, age 74, both hemispheres 30.1
Entorhinal gyrus
nTPM: 42.8
2613 Female, age 94, left hemisphere 49.9
1787 Male, age 76, left hemisphere 47.0
1938 Female, age 85, left hemisphere 45.0
2764 Male, age 80, right hemisphere 43.9
2686 Male, age 75, right hemisphere 40.4
2117 Female, age 91, right hemisphere 30.9
Hippocampus, CA1
nTPM: 44.5
2749 Male, age 80, left hemisphere 61.6
2045 Male, age 76, both hemispheres 42.9
2527 Male, age 74, both hemispheres 42.9
2082 Female, age 91, right hemisphere 37.7
1873 Female, age 85, both hemispheres 37.1
Hippocampus, CA2
nTPM: 39.0
1892 Male, age 76, both hemispheres 43.3
1963 Male, age 80, left hemisphere 42.7
1940 Female, age 85, left hemisphere 39.5
2437 Female, age 94, left hemisphere 39.3
2113 Female, age 91, right hemisphere 37.4
2249 Male, age 74, both hemispheres 31.8
Hippocampus, CA3
nTPM: 45.2
2861 Female, age 67, both hemispheres 55.3
2137 Male, age 80, left hemisphere 53.2
2620 Female, age 94, left hemisphere 51.5
1867 Male, age 76, both hemispheres 38.4
2436 Male, age 74, both hemispheres 38.2
1891 Female, age 85, both hemispheres 34.8
Parahippocampal cortex
nTPM: 44.9
1850 Male, age 80, both hemispheres 52.7
2245 Female, age 91, both hemispheres 47.6
2622 Female, age 67, right hemisphere 46.9
2693 Female, age 94, both hemispheres 46.4
1933 Female, age 85, both hemispheres 45.9
2692 Male, age 74, both hemispheres 45.7
1990 Female, age 91, right hemisphere 44.7
2532 Female, age 72, left hemisphere 41.4
2018 Male, age 76, both hemispheres 41.1
2250 Female, age 67, right hemisphere 36.2
Perirhinal gyrus
nTPM: 45.8
1847 Female, age 91, left hemisphere 56.4
1794 Male, age 80, right hemisphere 46.3
1841 Female, age 85, right hemisphere 46.2
2521 Female, age 94, right hemisphere 41.9
2848 Male, age 76, right hemisphere 38.2
Subiculum
nTPM: 37.3
2619 Male, age 74, both hemispheres 46.6
1901 Male, age 80, both hemispheres 40.9
1977 Female, age 85, both hemispheres 40.5
2042 Male, age 76, both hemispheres 34.2
2729 Female, age 91, right hemisphere 33.9
2438 Female, age 94, left hemisphere 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.6
Samples: 197

Max nTPM: 23.9
Min nTPM: 7.2
Std nTPM: 2.9
Median nTPM: 13.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 23.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 21.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 20.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 20.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 19.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 19.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 19.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 19.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 19.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 19.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 19.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.3
FF:10169-103B7 60 years, female 93.4
FF:10153-102I9 76 years, female 73.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.5
Pig sample Sample description nTPM
Subiculum
nTPM: 31.0
Samples: 4

Max nTPM: 36.1
Min nTPM: 28.2
Sample A Female 36.1
Sample B Female 28.2
Sample C Male 31.2
Sample D Male 28.3
Dorsal hippocampus
nTPM: 33.3
Samples: 4

Max nTPM: 37.8
Min nTPM: 26.9
Sample A Female 37.8
Sample B Female 35.2
Sample C Male 33.4
Sample D Male 26.9
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 36.0
Min nTPM: 28.9
Sample A Female 36.0
Sample B Female 30.6
Sample C Male 31.7
Sample D Male 28.9
Ventral hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 41.4
Min nTPM: 23.8
Sample A Female 34.4
Sample B Female 23.8
Sample C Male 41.4
Sample D Male 34.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.5
Sample A Male 11.1
Sample B Male 10.5
Sample C Female 10.7
Sample D Female 15.2
Hippocampal formation
nTPM: 10.9
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.4
Sample A Male 9.4
Sample B Male 11.0
Sample C Female 12.1
Sample D Female 10.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
73513780 Antisense, RP_051121_02_G02, Mouse strain C57BL/6J (56 days, male) 3.2

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