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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
175.3
nTPM
FANTOM5:
168.8
Scaled Tags Per Million
Pig:
62.3
nTPM
Allen mouse:
7.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
175.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 175.3
2188
Female, age 91, both hemispheres
210.3
2090
Male, age 80, both hemispheres
177.9
2301
Female, age 85, both hemispheres
163.8
1984
Male, age 76, both hemispheres
149.4
Dorsal cochlear nucleus nTPM: 151.7
2802
Male, age 74, right hemisphere
169.6
2378
Male, age 80, both hemispheres
162.0
2187
Female, age 91, both hemispheres
158.6
2058
Male, age 76, both hemispheres
139.1
2370
Male, age 61, both hemispheres
129.1
Dorsal tegmental nucleus nTPM: 141.4
2326
Male, age 74, both hemispheres
155.9
2083
Male, age 80, both hemispheres
153.7
1936
Male, age 76, left hemisphere
130.4
2358
Male, age 61, both hemispheres
125.5
Dorsolateral tegmental area nTPM: 139.6
2337
Male, age 61, both hemispheres
160.9
2654
Male, age 80, both hemispheres
160.7
2751
Female, age 85, both hemispheres
159.6
2360
Male, age 74, both hemispheres
121.2
2141
Male, age 76, both hemispheres
95.8
Kolliker-Fuse nucleus nTPM: 156.2
2793
Female, age 91, left hemisphere
200.0
2315
Male, age 76, right hemisphere
138.7
2163
Male, age 80, both hemispheres
129.9
Lateral lemniscal nuclei nTPM: 143.0
2320
Female, age 91, left hemisphere
174.3
2453
Male, age 74, right hemisphere
141.3
2036
Male, age 80, both hemispheres
139.6
2169
Male, age 76, both hemispheres
130.7
2746
Female, age 85, left hemisphere
128.8
Lateral parabrachial nucleus nTPM: 159.0
2792
Male, age 76, both hemispheres
193.0
2790
Male, age 61, both hemispheres
172.4
2013
Male, age 80, both hemispheres
154.0
2139
Female, age 85, right hemisphere
116.5
Lateral vestibular nucleus nTPM: 135.6
2311
Male, age 80, both hemispheres
143.0
2184
Male, age 76, both hemispheres
128.3
Locus coeruleus nTPM: 111.5
2720
Male, age 74, both hemispheres
137.7
2788
Male, age 74, unknown
125.5
2014
Male, age 55, unknown
120.6
2162
Male, age 80, both hemispheres
112.4
2317
Female, age 72, unknown
106.3
2123
Female, age 91, both hemispheres
92.7
1980
Male, age 76, both hemispheres
85.4
Medial parabrachial nucleus nTPM: 147.1
2463
Female, age 85, right hemisphere
155.0
2170
Female, age 91, both hemispheres
150.8
2854
Male, age 80, both hemispheres
147.2
2156
Male, age 61, both hemispheres
143.9
2786
Male, age 76, both hemispheres
138.7
Medial periolivary nuclei nTPM: 141.6
2458
Female, age 91, both hemispheres
171.4
2081
Male, age 80, both hemispheres
164.2
2791
Male, age 74, right hemisphere
147.1
2063
Male, age 76, both hemispheres
124.1
2171
Female, age 85, both hemispheres
101.4
Motor facial nucleus nTPM: 141.2
2697
Female, age 85, both hemispheres
164.5
2795
Female, age 91, both hemispheres
153.5
2365
Male, age 74, right hemisphere
151.4
2126
Male, age 61, both hemispheres
137.0
2327
Male, age 80, both hemispheres
127.1
2062
Male, age 76, both hemispheres
113.4
Motor trigeminal nucleus nTPM: 142.8
2321
Female, age 91, both hemispheres
166.0
2560
Male, age 74, both hemispheres
155.1
2309
Male, age 76, both hemispheres
148.3
2079
Male, age 80, both hemispheres
128.5
2335
Male, age 61, both hemispheres
116.0
Nuclei of the trapezoid body nTPM: 132.2
2368
Female, age 91, both hemispheres
162.1
2166
Male, age 80, both hemispheres
159.1
2159
Male, age 61, both hemispheres
121.1
1983
Male, age 76, both hemispheres
120.9
2735
Female, age 85, both hemispheres
97.6
Nucleus raphe magnus nTPM: 128.1
2459
Female, age 91, both hemispheres
168.1
2328
Male, age 80, both hemispheres
142.4
2051
Male, age 76, both hemispheres
138.6
2455
Male, age 74, both hemispheres
136.1
2160
Male, age 61, both hemispheres
98.2
2172
Female, age 85, both hemispheres
85.1
Paramedian reticular nucleus nTPM: 144.0
2052
Male, age 76, both hemispheres
182.8
2057
Male, age 80, both hemispheres
144.4
2050
Female, age 85, both hemispheres
126.6
2313
Male, age 61, both hemispheres
122.1
Pedunculopontine tegmental nucleus nTPM: 142.4
2338
Male, age 61, both hemispheres
164.5
2334
Male, age 80, both hemispheres
142.0
1921
Female, age 85, both hemispheres
120.8
Pontine nuclei nTPM: 147.2
2319
Female, age 91, both hemispheres
186.3
2454
Male, age 74, left hemisphere
183.6
2109
Female, age 72, unknown
151.2
2115
Male, age 80, left hemisphere
150.2
1968
Male, age 76, left hemisphere
149.9
1863
Male, age 55, unknown
144.2
2727
Male, age 61, right hemisphere
111.4
2787
Female, age 85, both hemispheres
100.8
Pontine raphe nucleus nTPM: 110.3
2853
Male, age 76, midline
111.9
2122
Female, age 85, midline
108.8
Posteroventral cochlear nucleus nTPM: 175.1
2135
Female, age 91, both hemispheres
231.6
2341
Male, age 80, both hemispheres
209.1
2070
Male, age 76, both hemispheres
163.1
2371
Male, age 61, both hemispheres
147.2
2752
Female, age 85, both hemispheres
124.5
Principal sensory trigeminal nucleus nTPM: 134.1
2367
Female, age 91, left hemisphere
174.6
2324
Male, age 76, both hemispheres
128.8
2008
Male, age 80, left hemisphere
119.2
2158
Male, age 61, both hemispheres
113.9
Reticular pontine nucleus, caudal nTPM: 157.7
2457
Female, age 91, both hemispheres
189.5
2559
Male, age 74, both hemispheres
173.3
2092
Male, age 76, both hemispheres
152.0
2332
Male, age 80, right hemisphere
116.1
Reticular pontine nucleus, oral nTPM: 157.0
2366
Female, age 91, both hemispheres
203.7
2361
Male, age 74, both hemispheres
155.4
1939
Male, age 80, both hemispheres
148.9
2167
Male, age 76, both hemispheres
146.2
2012
Female, age 85, both hemispheres
130.6
Reticulotegmental nucleus nTPM: 132.3
2322
Female, age 91, both hemispheres
149.7
2452
Male, age 74, both hemispheres
146.1
2333
Male, age 80, both hemispheres
128.4
2325
Male, age 76, both hemispheres
105.0
Spinal trigeminal nucleus, oral nTPM: 128.1
1978
Male, age 76, both hemispheres
140.4
2164
Male, age 80, both hemispheres
127.3
2737
Female, age 85, both hemispheres
116.7
Subcoeruleus area nTPM: 141.8
2369
Female, age 85, left hemisphere
182.5
2451
Male, age 74, both hemispheres
146.1
2089
Male, age 76, left hemisphere
138.1
1958
Male, age 80, both hemispheres
131.5
2323
Female, age 91, left hemisphere
111.1
Superior olive nTPM: 155.3
2020
Male, age 76, both hemispheres
177.5
2561
Female, age 91, both hemispheres
170.3
2364
Male, age 74, right hemisphere
152.7
2329
Male, age 80, right hemisphere
146.8
1875
Female, age 85, both hemispheres
129.0
Ventral periolivary nuclei nTPM: 142.6
2023
Male, age 76, both hemispheres
190.1
2794
Female, age 91, left hemisphere
147.1
2165
Male, age 80, both hemispheres
127.1
2130
Female, age 85, both hemispheres
106.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 146.1
2456
Female, age 91, both hemispheres
176.4
1959
Male, age 76, both hemispheres
153.1
2840
Female, age 85, both hemispheres
145.0
2449
Male, age 74, both hemispheres
135.4
2161
Male, age 80, both hemispheres
134.6
2359
Male, age 61, both hemispheres
132.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
62.3
Pig sample
Sample description
nTPM
Pons nTPM: 62.3
Samples: 4
Max nTPM: 71.8
Min nTPM: 56.9
Sample A
Female
59.2
Sample B
Female
61.4
Sample C
Male
56.9
Sample D
Male
71.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
