HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:47.7 nTPM
HPA Brain:140.4 nTPM
GTEx:47.7 nTPM
FANTOM5:151.3 Scaled Tags Per Million
Pig:100.9 nTPM
Mouse:59.1 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036610
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 140.4
Sample id Sample description nTPM
Hippocampus
nTPM: 137.6
1911 Female, age 85, right hemisphere 165.8
2621 Female, age 67, right hemisphere 152.8
1855 Male, age 76, left hemisphere 133.2
1898 Male, age 80, left hemisphere 130.8
2529 Female, age 94, left hemisphere 127.2
2148 Female, age 91, left hemisphere 115.9
Dentate gyrus
nTPM: 129.3
2530 Female, age 94, left hemisphere 147.3
2010 Male, age 76, both hemispheres 146.8
2531 Female, age 67, both hemispheres 130.4
2246 Female, age 85, both hemispheres 128.0
1927 Female, age 91, both hemispheres 112.0
2528 Male, age 74, both hemispheres 111.3
Entorhinal gyrus
nTPM: 125.5
2117 Female, age 91, right hemisphere 139.3
1938 Female, age 85, left hemisphere 135.9
2686 Male, age 75, right hemisphere 133.4
2764 Male, age 80, right hemisphere 125.0
2613 Female, age 94, left hemisphere 120.9
1787 Male, age 76, left hemisphere 98.6
Hippocampus, CA1
nTPM: 140.4
2749 Male, age 80, left hemisphere 216.2
1873 Female, age 85, both hemispheres 151.5
2527 Male, age 74, both hemispheres 128.6
2082 Female, age 91, right hemisphere 114.0
2045 Male, age 76, both hemispheres 91.7
Hippocampus, CA2
nTPM: 129.2
1963 Male, age 80, left hemisphere 180.5
2249 Male, age 74, both hemispheres 127.2
1892 Male, age 76, both hemispheres 119.7
1940 Female, age 85, left hemisphere 117.6
2113 Female, age 91, right hemisphere 117.3
2437 Female, age 94, left hemisphere 112.9
Hippocampus, CA3
nTPM: 128.0
2137 Male, age 80, left hemisphere 185.6
1891 Female, age 85, both hemispheres 150.0
1867 Male, age 76, both hemispheres 126.6
2861 Female, age 67, both hemispheres 109.0
2620 Female, age 94, left hemisphere 100.0
2436 Male, age 74, both hemispheres 96.5
Parahippocampal cortex
nTPM: 119.5
2532 Female, age 72, left hemisphere 139.1
1850 Male, age 80, both hemispheres 130.6
2692 Male, age 74, both hemispheres 128.4
2018 Male, age 76, both hemispheres 125.7
1933 Female, age 85, both hemispheres 120.2
2245 Female, age 91, both hemispheres 120.0
2622 Female, age 67, right hemisphere 117.3
1990 Female, age 91, right hemisphere 113.3
2693 Female, age 94, both hemispheres 108.5
2250 Female, age 67, right hemisphere 91.8
Perirhinal gyrus
nTPM: 108.4
1841 Female, age 85, right hemisphere 126.0
1794 Male, age 80, right hemisphere 114.3
2521 Female, age 94, right hemisphere 100.7
2848 Male, age 76, right hemisphere 100.6
1847 Female, age 91, left hemisphere 100.4
Subiculum
nTPM: 139.9
1901 Male, age 80, both hemispheres 168.7
2042 Male, age 76, both hemispheres 164.9
2438 Female, age 94, left hemisphere 153.0
1977 Female, age 85, both hemispheres 135.0
2619 Male, age 74, both hemispheres 109.0
2729 Female, age 91, right hemisphere 108.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.7
Samples: 197

Max nTPM: 127.2
Min nTPM: 7.3
Std nTPM: 20.3
Median nTPM: 45.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 127.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 112.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 109.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 107.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 102.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 99.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 97.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 96.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 93.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 88.0
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 85.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 151.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.3
FF:10153-102I9 76 years, female 163.4
FF:10169-103B7 60 years, female 139.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.9
Pig sample Sample description nTPM
Subiculum
nTPM: 72.1
Samples: 4

Max nTPM: 78.8
Min nTPM: 62.8
Sample A Female 78.8
Sample B Female 71.3
Sample C Male 75.6
Sample D Male 62.8
Dorsal hippocampus
nTPM: 100.9
Samples: 4

Max nTPM: 116.3
Min nTPM: 84.3
Sample A Female 106.7
Sample B Female 116.3
Sample C Male 84.3
Sample D Male 96.2
Entorhinal cortex
nTPM: 71.0
Samples: 4

Max nTPM: 74.5
Min nTPM: 67.7
Sample A Female 74.5
Sample B Female 68.9
Sample C Male 67.7
Sample D Male 72.8
Ventral hippocampus
nTPM: 97.7
Samples: 4

Max nTPM: 110.3
Min nTPM: 80.8
Sample A Female 97.2
Sample B Female 80.8
Sample C Male 102.6
Sample D Male 110.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.6
Samples: 4

Max nTPM: 57.3
Min nTPM: 52.0
Sample A Male 52.4
Sample B Male 52.0
Sample C Female 52.8
Sample D Female 57.3
Hippocampal formation
nTPM: 59.2
Samples: 4

Max nTPM: 69.2
Min nTPM: 50.6
Sample A Male 55.5
Sample B Male 69.2
Sample C Female 61.3
Sample D Female 50.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
69526809 Antisense, RP_050421_01_F10, Mouse strain C57BL/6J (56 days, male) 12.0

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