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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.5
nTPM
Monaco:
65.5
nTPM
Schmiedel:
84.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.5
HPA sample
nTPM
gdT-cell nTPM: 69.3
Samples: 6
Max nTPM: 110.5
Min nTPM: 43.2
P10809_1007
43.2
P10809_1022
77.6
P10809_1041
110.5
P10809_1060
65.8
P10809_1077
52.4
P10809_1098
66.4
MAIT T-cell nTPM: 77.5
Samples: 6
Max nTPM: 112.8
Min nTPM: 40.6
P10809_1006
40.6
P10809_1024
76.6
P10809_1043
109.0
P10809_1062
68.7
P10809_1083
57.2
P10809_1097
112.8
Memory CD4 T-cell nTPM: 67.1
Samples: 6
Max nTPM: 80.7
Min nTPM: 42.8
P10809_1014
42.8
P10809_1026
80.7
P10809_1045
74.7
P10809_1064
70.6
P10809_1086
63.5
P10809_1113
70.4
Memory CD8 T-cell nTPM: 72.4
Samples: 5
Max nTPM: 86.6
Min nTPM: 48.2
P10809_1012
48.2
P10809_1027
79.7
P10809_1046
86.6
P10809_1065
67.4
P10809_1111
79.9
Naive CD4 T-cell nTPM: 66.4
Samples: 6
Max nTPM: 99.0
Min nTPM: 36.1
P10809_1015
36.1
P10809_1030
73.6
P10809_1049
99.0
P10809_1068
64.0
P10809_1085
54.6
P10809_1112
71.0
Naive CD8 T-cell nTPM: 63.4
Samples: 6
Max nTPM: 77.4
Min nTPM: 51.8
P10809_1016
53.1
P10809_1031
65.5
P10809_1050
64.6
P10809_1069
67.7
P10809_1087
51.8
P10809_1110
77.4
T-reg nTPM: 84.5
Samples: 6
Max nTPM: 122.4
Min nTPM: 44.7
P10809_1018
44.7
P10809_1037
60.2
P10809_1056
122.4
P10809_1075
86.8
P10809_1094
99.1
P10809_1106
94.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.8
Samples: 4
Max nTPM: 72.4
Min nTPM: 27.6
RHH5202_R3573
65.6
RHH5230_R3602
37.6
RHH5259_R3631
27.6
RHH5288_R3660
72.4
Effector memory CD8 T-cell nTPM: 49.0
Samples: 4
Max nTPM: 62.6
Min nTPM: 37.8
RHH5203_R3574
62.6
RHH5231_R3603
43.9
RHH5260_R3632
37.8
RHH5289_R3661
51.6
MAIT T-cell nTPM: 57.2
Samples: 4
Max nTPM: 77.1
Min nTPM: 29.8
RHH5233_R3605
77.1
RHH5205_R3576
29.8
RHH5262_R3634
45.0
RHH5297_R3663
76.7
Memory CD4 T-cell TFH nTPM: 65.1
Samples: 4
Max nTPM: 80.8
Min nTPM: 46.3
RHH5300_R3666
80.8
RHH5236_R3608
70.4
RHH5265_R3637
46.3
RHH5208_R3579
63.0
Memory CD4 T-cell Th1 nTPM: 51.5
Samples: 4
Max nTPM: 84.3
Min nTPM: 26.2
RHH5210_R3581
46.4
RHH5302_R3668
84.3
RHH5238_R3610
26.2
RHH5267_R3639
49.1
Memory CD4 T-cell Th1/Th17 nTPM: 56.8
Samples: 4
Max nTPM: 91.7
Min nTPM: 17.4
RHH5303_R3669
85.2
RHH5211_R3582
91.7
RHH5239_R3611
17.4
RHH5268_R3640
32.9
Memory CD4 T-cell Th17 nTPM: 38.1
Samples: 4
Max nTPM: 61.4
Min nTPM: 23.8
RHH5304_R3670
39.6
RHH5212_R3583
61.4
RHH5240_R3612
23.8
RHH5269_R3641
27.4
Memory CD4 T-cell Th2 nTPM: 63.9
Samples: 4
Max nTPM: 75.4
Min nTPM: 56.6
RHH5305_R3671
66.8
RHH5213_R3584
56.6
RHH5241_R3613
75.4
RHH5270_R3642
56.7
Naive CD4 T-cell nTPM: 48.7
Samples: 4
Max nTPM: 73.2
Min nTPM: 24.6
RHH5306_R3672
59.7
RHH5214_R3585
73.2
RHH5242_R3614
37.2
RHH5271_R3643
24.6
Naive CD8 T-cell nTPM: 50.7
Samples: 4
Max nTPM: 66.5
Min nTPM: 31.4
RHH5201_R3572
60.7
RHH5229_R3601
31.4
RHH5258_R3630
66.5
RHH5287_R3659
44.3
Non-Vd2 gdTCR nTPM: 57.4
Samples: 4
Max nTPM: 73.0
Min nTPM: 29.6
RHH5235_R3607
29.6
RHH5264_R3636
73.0
RHH5207_R3578
55.6
RHH5299_R3665
71.5
T-reg nTPM: 53.0
Samples: 4
Max nTPM: 72.7
Min nTPM: 34.8
RHH5301_R3667
72.7
RHH5237_R3609
66.0
RHH5266_R3638
34.8
RHH5209_R3580
38.6
Terminal effector memory CD4 T-cell nTPM: 42.5
Samples: 2
Max nTPM: 58.3
Min nTPM: 26.7
RHH5243_R3615
26.7
RHH5272_R3644
58.3
Terminal effector memory CD8 T-cell nTPM: 58.4
Samples: 4
Max nTPM: 86.8
Min nTPM: 36.6
RHH5232_R3604
53.2
RHH5204_R3575
86.8
RHH5261_R3633
36.6
RHH5296_R3662
56.8
Vd2 gdTCR nTPM: 65.5
Samples: 4
Max nTPM: 102.3
Min nTPM: 37.9
RHH5234_R3606
38.5
RHH5206_R3577
83.4
RHH5263_R3635
37.9
RHH5298_R3664
102.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
