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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.0
nTPM
Monaco:
79.7
nTPM
Schmiedel:
118.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.0
HPA sample
nTPM
gdT-cell nTPM: 56.4
Samples: 6
Max nTPM: 66.8
Min nTPM: 48.4
P10809_1007
48.4
P10809_1022
66.8
P10809_1041
60.1
P10809_1060
50.0
P10809_1077
54.5
P10809_1098
58.4
MAIT T-cell nTPM: 78.0
Samples: 6
Max nTPM: 102.3
Min nTPM: 54.9
P10809_1006
69.7
P10809_1024
102.3
P10809_1043
54.9
P10809_1062
61.2
P10809_1083
83.8
P10809_1097
95.9
Memory CD4 T-cell nTPM: 63.9
Samples: 6
Max nTPM: 76.3
Min nTPM: 50.3
P10809_1014
50.3
P10809_1026
63.7
P10809_1045
65.3
P10809_1064
61.6
P10809_1086
66.2
P10809_1113
76.3
Memory CD8 T-cell nTPM: 61.8
Samples: 5
Max nTPM: 71.1
Min nTPM: 47.9
P10809_1012
47.9
P10809_1027
71.1
P10809_1046
51.9
P10809_1065
68.5
P10809_1111
69.8
Naive CD4 T-cell nTPM: 71.3
Samples: 6
Max nTPM: 83.6
Min nTPM: 59.0
P10809_1015
59.0
P10809_1030
83.6
P10809_1049
74.9
P10809_1068
70.4
P10809_1085
71.3
P10809_1112
68.7
Naive CD8 T-cell nTPM: 64.6
Samples: 6
Max nTPM: 72.8
Min nTPM: 57.1
P10809_1016
57.1
P10809_1031
65.6
P10809_1050
62.6
P10809_1069
69.4
P10809_1087
60.1
P10809_1110
72.8
T-reg nTPM: 75.8
Samples: 6
Max nTPM: 85.4
Min nTPM: 54.7
P10809_1018
54.7
P10809_1037
76.7
P10809_1056
85.4
P10809_1075
79.4
P10809_1094
79.6
P10809_1106
78.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 63.7
Samples: 4
Max nTPM: 85.5
Min nTPM: 54.0
RHH5202_R3573
85.5
RHH5230_R3602
56.5
RHH5259_R3631
54.0
RHH5288_R3660
58.9
Effector memory CD8 T-cell nTPM: 72.2
Samples: 4
Max nTPM: 83.5
Min nTPM: 58.2
RHH5203_R3574
83.5
RHH5231_R3603
80.8
RHH5260_R3632
58.2
RHH5289_R3661
66.2
MAIT T-cell nTPM: 71.1
Samples: 4
Max nTPM: 90.8
Min nTPM: 52.9
RHH5233_R3605
90.8
RHH5205_R3576
52.9
RHH5262_R3634
65.3
RHH5297_R3663
75.3
Memory CD4 T-cell TFH nTPM: 77.2
Samples: 4
Max nTPM: 106.6
Min nTPM: 65.7
RHH5300_R3666
66.7
RHH5236_R3608
106.6
RHH5265_R3637
69.9
RHH5208_R3579
65.7
Memory CD4 T-cell Th1 nTPM: 61.0
Samples: 4
Max nTPM: 73.9
Min nTPM: 46.5
RHH5210_R3581
73.9
RHH5302_R3668
68.6
RHH5238_R3610
46.5
RHH5267_R3639
54.8
Memory CD4 T-cell Th1/Th17 nTPM: 78.8
Samples: 4
Max nTPM: 116.1
Min nTPM: 51.6
RHH5303_R3669
93.2
RHH5211_R3582
116.1
RHH5239_R3611
51.6
RHH5268_R3640
54.4
Memory CD4 T-cell Th17 nTPM: 62.8
Samples: 4
Max nTPM: 80.7
Min nTPM: 47.9
RHH5304_R3670
69.2
RHH5212_R3583
80.7
RHH5240_R3612
53.4
RHH5269_R3641
47.9
Memory CD4 T-cell Th2 nTPM: 68.5
Samples: 4
Max nTPM: 97.7
Min nTPM: 49.2
RHH5305_R3671
61.5
RHH5213_R3584
65.6
RHH5241_R3613
97.7
RHH5270_R3642
49.2
Naive CD4 T-cell nTPM: 74.8
Samples: 4
Max nTPM: 85.0
Min nTPM: 62.3
RHH5306_R3672
62.3
RHH5214_R3585
85.0
RHH5242_R3614
77.0
RHH5271_R3643
74.7
Naive CD8 T-cell nTPM: 79.7
Samples: 4
Max nTPM: 102.5
Min nTPM: 54.6
RHH5201_R3572
94.5
RHH5229_R3601
54.6
RHH5258_R3630
102.5
RHH5287_R3659
67.1
Non-Vd2 gdTCR nTPM: 58.1
Samples: 4
Max nTPM: 75.5
Min nTPM: 30.3
RHH5235_R3607
30.3
RHH5264_R3636
75.5
RHH5207_R3578
66.7
RHH5299_R3665
59.9
T-reg nTPM: 73.9
Samples: 4
Max nTPM: 82.2
Min nTPM: 64.1
RHH5301_R3667
77.5
RHH5237_R3609
82.2
RHH5266_R3638
64.1
RHH5209_R3580
71.6
Terminal effector memory CD4 T-cell nTPM: 62.1
Samples: 2
Max nTPM: 77.2
Min nTPM: 47.0
RHH5243_R3615
47.0
RHH5272_R3644
77.2
Terminal effector memory CD8 T-cell nTPM: 63.2
Samples: 4
Max nTPM: 80.3
Min nTPM: 46.7
RHH5232_R3604
46.7
RHH5204_R3575
71.1
RHH5261_R3633
54.7
RHH5296_R3662
80.3
Vd2 gdTCR nTPM: 71.7
Samples: 4
Max nTPM: 88.0
Min nTPM: 58.2
RHH5234_R3606
58.2
RHH5206_R3577
88.0
RHH5263_R3635
73.2
RHH5298_R3664
67.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
