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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
102.5
nTPM
Monaco:
257.1
nTPM
Schmiedel:
202.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.5
HPA sample
nTPM
gdT-cell nTPM: 65.0
Samples: 6
Max nTPM: 83.3
Min nTPM: 51.6
P10809_1007
51.6
P10809_1022
83.3
P10809_1041
66.3
P10809_1060
66.1
P10809_1077
62.5
P10809_1098
60.4
MAIT T-cell nTPM: 102.5
Samples: 6
Max nTPM: 136.6
Min nTPM: 81.6
P10809_1006
81.6
P10809_1024
136.6
P10809_1043
97.5
P10809_1062
103.5
P10809_1083
95.6
P10809_1097
100.0
Memory CD4 T-cell nTPM: 71.8
Samples: 6
Max nTPM: 94.7
Min nTPM: 53.7
P10809_1014
53.7
P10809_1026
94.7
P10809_1045
72.2
P10809_1064
61.0
P10809_1086
83.2
P10809_1113
65.9
Memory CD8 T-cell nTPM: 60.2
Samples: 5
Max nTPM: 75.9
Min nTPM: 43.8
P10809_1012
43.8
P10809_1027
67.9
P10809_1046
75.9
P10809_1065
51.9
P10809_1111
61.5
Naive CD4 T-cell nTPM: 52.9
Samples: 6
Max nTPM: 69.3
Min nTPM: 35.6
P10809_1015
35.6
P10809_1030
69.3
P10809_1049
60.0
P10809_1068
45.3
P10809_1085
56.4
P10809_1112
50.5
Naive CD8 T-cell nTPM: 62.4
Samples: 6
Max nTPM: 91.3
Min nTPM: 46.1
P10809_1016
46.1
P10809_1031
91.3
P10809_1050
60.0
P10809_1069
52.1
P10809_1087
57.2
P10809_1110
67.6
T-reg nTPM: 101.9
Samples: 6
Max nTPM: 170.6
Min nTPM: 61.6
P10809_1018
70.0
P10809_1037
87.8
P10809_1056
120.0
P10809_1075
61.6
P10809_1094
170.6
P10809_1106
101.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
257.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 168.5
Samples: 4
Max nTPM: 228.8
Min nTPM: 89.0
RHH5202_R3573
228.8
RHH5230_R3602
197.1
RHH5259_R3631
89.0
RHH5288_R3660
158.9
Effector memory CD8 T-cell nTPM: 138.4
Samples: 4
Max nTPM: 193.9
Min nTPM: 108.0
RHH5203_R3574
134.4
RHH5231_R3603
117.3
RHH5260_R3632
108.0
RHH5289_R3661
193.9
MAIT T-cell nTPM: 257.1
Samples: 4
Max nTPM: 295.8
Min nTPM: 201.7
RHH5233_R3605
287.9
RHH5205_R3576
295.8
RHH5262_R3634
201.7
RHH5297_R3663
242.8
Memory CD4 T-cell TFH nTPM: 147.7
Samples: 4
Max nTPM: 182.3
Min nTPM: 126.5
RHH5300_R3666
138.3
RHH5236_R3608
182.3
RHH5265_R3637
126.5
RHH5208_R3579
143.8
Memory CD4 T-cell Th1 nTPM: 124.6
Samples: 4
Max nTPM: 151.6
Min nTPM: 113.0
RHH5210_R3581
151.6
RHH5302_R3668
120.6
RHH5238_R3610
113.0
RHH5267_R3639
113.0
Memory CD4 T-cell Th1/Th17 nTPM: 200.3
Samples: 4
Max nTPM: 267.4
Min nTPM: 132.6
RHH5303_R3669
222.3
RHH5211_R3582
267.4
RHH5239_R3611
178.8
RHH5268_R3640
132.6
Memory CD4 T-cell Th17 nTPM: 206.9
Samples: 4
Max nTPM: 250.5
Min nTPM: 174.3
RHH5304_R3670
208.9
RHH5212_R3583
250.5
RHH5240_R3612
193.9
RHH5269_R3641
174.3
Memory CD4 T-cell Th2 nTPM: 112.7
Samples: 4
Max nTPM: 136.8
Min nTPM: 89.6
RHH5305_R3671
99.0
RHH5213_R3584
125.3
RHH5241_R3613
136.8
RHH5270_R3642
89.6
Naive CD4 T-cell nTPM: 114.3
Samples: 4
Max nTPM: 131.7
Min nTPM: 99.9
RHH5306_R3672
120.0
RHH5214_R3585
131.7
RHH5242_R3614
105.5
RHH5271_R3643
99.9
Naive CD8 T-cell nTPM: 144.9
Samples: 4
Max nTPM: 203.6
Min nTPM: 122.5
RHH5201_R3572
203.6
RHH5229_R3601
129.8
RHH5258_R3630
122.5
RHH5287_R3659
123.8
Non-Vd2 gdTCR nTPM: 130.6
Samples: 4
Max nTPM: 155.7
Min nTPM: 96.6
RHH5235_R3607
131.9
RHH5264_R3636
96.6
RHH5207_R3578
155.7
RHH5299_R3665
138.3
T-reg nTPM: 146.0
Samples: 4
Max nTPM: 202.9
Min nTPM: 113.8
RHH5301_R3667
113.8
RHH5237_R3609
202.9
RHH5266_R3638
115.2
RHH5209_R3580
152.0
Terminal effector memory CD4 T-cell nTPM: 136.1
Samples: 2
Max nTPM: 145.5
Min nTPM: 126.7
RHH5243_R3615
126.7
RHH5272_R3644
145.5
Terminal effector memory CD8 T-cell nTPM: 132.4
Samples: 4
Max nTPM: 173.7
Min nTPM: 95.7
RHH5232_R3604
173.7
RHH5204_R3575
117.7
RHH5261_R3633
95.7
RHH5296_R3662
142.5
Vd2 gdTCR nTPM: 160.2
Samples: 4
Max nTPM: 184.7
Min nTPM: 140.0
RHH5234_R3606
184.7
RHH5206_R3577
168.1
RHH5263_R3635
148.0
RHH5298_R3664
140.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
