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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
15.8
nTPM
Monaco:
128.1
nTPM
Schmiedel:
58.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.8
HPA sample
nTPM
gdT-cell nTPM: 15.8
Samples: 6
Max nTPM: 22.0
Min nTPM: 13.8
P10809_1007
13.8
P10809_1022
13.8
P10809_1041
16.4
P10809_1060
22.0
P10809_1077
14.9
P10809_1098
13.8
MAIT T-cell nTPM: 8.8
Samples: 6
Max nTPM: 11.4
Min nTPM: 4.9
P10809_1006
10.7
P10809_1024
4.9
P10809_1043
7.9
P10809_1062
11.4
P10809_1083
7.8
P10809_1097
9.9
Memory CD4 T-cell nTPM: 3.3
Samples: 6
Max nTPM: 8.6
Min nTPM: 0.0
P10809_1014
1.7
P10809_1026
0.0
P10809_1045
1.5
P10809_1064
8.6
P10809_1086
6.4
P10809_1113
1.7
Memory CD8 T-cell nTPM: 10.3
Samples: 5
Max nTPM: 13.2
Min nTPM: 7.6
P10809_1012
7.6
P10809_1027
13.2
P10809_1046
9.5
P10809_1065
12.6
P10809_1111
8.4
Naive CD4 T-cell nTPM: 0.2
Samples: 6
Max nTPM: 0.4
Min nTPM: 0.0
P10809_1015
0.3
P10809_1030
0.0
P10809_1049
0.0
P10809_1068
0.4
P10809_1085
0.0
P10809_1112
0.2
Naive CD8 T-cell nTPM: 6.0
Samples: 6
Max nTPM: 13.5
Min nTPM: 0.7
P10809_1016
0.7
P10809_1031
2.5
P10809_1050
6.2
P10809_1069
8.6
P10809_1087
13.5
P10809_1110
4.4
T-reg nTPM: 1.0
Samples: 6
Max nTPM: 3.5
Min nTPM: 0.0
P10809_1018
1.3
P10809_1037
0.0
P10809_1056
3.5
P10809_1075
0.4
P10809_1094
0.0
P10809_1106
0.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
128.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 20.6
Min nTPM: 18.4
RHH5202_R3573
20.6
RHH5230_R3602
19.4
RHH5259_R3631
18.4
RHH5288_R3660
19.5
Effector memory CD8 T-cell nTPM: 70.0
Samples: 4
Max nTPM: 104.0
Min nTPM: 54.5
RHH5203_R3574
104.0
RHH5231_R3603
54.5
RHH5260_R3632
65.5
RHH5289_R3661
55.8
MAIT T-cell nTPM: 81.7
Samples: 4
Max nTPM: 138.3
Min nTPM: 52.1
RHH5233_R3605
75.8
RHH5205_R3576
138.3
RHH5262_R3634
60.7
RHH5297_R3663
52.1
Memory CD4 T-cell TFH nTPM: 8.7
Samples: 4
Max nTPM: 12.8
Min nTPM: 5.3
RHH5300_R3666
6.6
RHH5236_R3608
5.3
RHH5265_R3637
10.1
RHH5208_R3579
12.8
Memory CD4 T-cell Th1 nTPM: 13.4
Samples: 4
Max nTPM: 20.5
Min nTPM: 9.5
RHH5210_R3581
20.5
RHH5302_R3668
13.8
RHH5238_R3610
9.5
RHH5267_R3639
9.9
Memory CD4 T-cell Th1/Th17 nTPM: 18.8
Samples: 4
Max nTPM: 28.7
Min nTPM: 9.0
RHH5303_R3669
26.2
RHH5211_R3582
28.7
RHH5239_R3611
9.0
RHH5268_R3640
11.2
Memory CD4 T-cell Th17 nTPM: 10.8
Samples: 4
Max nTPM: 17.1
Min nTPM: 3.9
RHH5304_R3670
17.1
RHH5212_R3583
15.1
RHH5240_R3612
3.9
RHH5269_R3641
7.1
Memory CD4 T-cell Th2 nTPM: 8.4
Samples: 4
Max nTPM: 17.3
Min nTPM: 3.0
RHH5305_R3671
3.2
RHH5213_R3584
17.3
RHH5241_R3613
3.0
RHH5270_R3642
9.9
Naive CD4 T-cell nTPM: 4.6
Samples: 4
Max nTPM: 5.9
Min nTPM: 1.7
RHH5306_R3672
1.7
RHH5214_R3585
5.9
RHH5242_R3614
5.3
RHH5271_R3643
5.3
Naive CD8 T-cell nTPM: 0.9
Samples: 4
Max nTPM: 3.2
Min nTPM: 0.0
RHH5201_R3572
3.2
RHH5229_R3601
0.2
RHH5258_R3630
0.0
RHH5287_R3659
0.3
Non-Vd2 gdTCR nTPM: 106.2
Samples: 4
Max nTPM: 145.1
Min nTPM: 76.6
RHH5235_R3607
112.2
RHH5264_R3636
90.9
RHH5207_R3578
145.1
RHH5299_R3665
76.6
T-reg nTPM: 8.2
Samples: 4
Max nTPM: 14.8
Min nTPM: 4.3
RHH5301_R3667
8.8
RHH5237_R3609
4.3
RHH5266_R3638
4.7
RHH5209_R3580
14.8
Terminal effector memory CD4 T-cell nTPM: 60.8
Samples: 2
Max nTPM: 74.1
Min nTPM: 47.5
RHH5243_R3615
47.5
RHH5272_R3644
74.1
Terminal effector memory CD8 T-cell nTPM: 96.2
Samples: 4
Max nTPM: 166.8
Min nTPM: 68.8
RHH5232_R3604
69.3
RHH5204_R3575
166.8
RHH5261_R3633
68.8
RHH5296_R3662
79.7
Vd2 gdTCR nTPM: 128.1
Samples: 4
Max nTPM: 214.9
Min nTPM: 80.5
RHH5234_R3606
111.2
RHH5206_R3577
214.9
RHH5263_R3635
105.8
RHH5298_R3664
80.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
