HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:24.3 nTPM
HPA Brain:24.1 nTPM
GTEx:24.3 nTPM
FANTOM5:35.8 Scaled Tags Per Million
Pig:66.1 nTPM
Mouse:108.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028941
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.2
1898 Male, age 80, left hemisphere 25.3
1855 Male, age 76, left hemisphere 23.3
2621 Female, age 67, right hemisphere 21.0
1911 Female, age 85, right hemisphere 20.6
2529 Female, age 94, left hemisphere 18.9
2148 Female, age 91, left hemisphere 17.9
Dentate gyrus
nTPM: 22.1
2010 Male, age 76, both hemispheres 24.2
1927 Female, age 91, both hemispheres 23.9
2528 Male, age 74, both hemispheres 22.1
2530 Female, age 94, left hemisphere 21.8
2246 Female, age 85, both hemispheres 21.7
2531 Female, age 67, both hemispheres 19.1
Entorhinal gyrus
nTPM: 19.1
1938 Female, age 85, left hemisphere 21.4
2117 Female, age 91, right hemisphere 19.8
2764 Male, age 80, right hemisphere 18.9
1787 Male, age 76, left hemisphere 18.4
2613 Female, age 94, left hemisphere 18.3
2686 Male, age 75, right hemisphere 17.6
Hippocampus, CA1
nTPM: 24.1
2749 Male, age 80, left hemisphere 29.7
2045 Male, age 76, both hemispheres 24.8
2527 Male, age 74, both hemispheres 24.3
1873 Female, age 85, both hemispheres 23.5
2082 Female, age 91, right hemisphere 18.4
Hippocampus, CA2
nTPM: 22.3
1892 Male, age 76, both hemispheres 26.5
2249 Male, age 74, both hemispheres 26.4
1963 Male, age 80, left hemisphere 23.3
2113 Female, age 91, right hemisphere 21.5
1940 Female, age 85, left hemisphere 19.4
2437 Female, age 94, left hemisphere 16.4
Hippocampus, CA3
nTPM: 21.7
2137 Male, age 80, left hemisphere 27.3
1867 Male, age 76, both hemispheres 25.8
2436 Male, age 74, both hemispheres 24.3
1891 Female, age 85, both hemispheres 21.6
2861 Female, age 67, both hemispheres 16.2
2620 Female, age 94, left hemisphere 15.1
Parahippocampal cortex
nTPM: 20.9
1850 Male, age 80, both hemispheres 27.5
2693 Female, age 94, both hemispheres 24.3
1933 Female, age 85, both hemispheres 22.4
2250 Female, age 67, right hemisphere 21.2
1990 Female, age 91, right hemisphere 21.0
2018 Male, age 76, both hemispheres 20.9
2532 Female, age 72, left hemisphere 19.9
2692 Male, age 74, both hemispheres 18.6
2245 Female, age 91, both hemispheres 17.1
2622 Female, age 67, right hemisphere 16.2
Perirhinal gyrus
nTPM: 23.9
1847 Female, age 91, left hemisphere 26.2
2521 Female, age 94, right hemisphere 26.0
1841 Female, age 85, right hemisphere 24.2
1794 Male, age 80, right hemisphere 22.5
2848 Male, age 76, right hemisphere 20.4
Subiculum
nTPM: 19.8
1901 Male, age 80, both hemispheres 23.3
2729 Female, age 91, right hemisphere 20.2
2042 Male, age 76, both hemispheres 20.1
1977 Female, age 85, both hemispheres 19.3
2438 Female, age 94, left hemisphere 18.1
2619 Male, age 74, both hemispheres 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.3
Samples: 197

Max nTPM: 46.8
Min nTPM: 15.7
Std nTPM: 4.9
Median nTPM: 23.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 44.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 39.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 36.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 35.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 33.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 33.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 32.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 32.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.8
FF:10153-102I9 76 years, female 36.3
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.1
Pig sample Sample description nTPM
Subiculum
nTPM: 57.0
Samples: 4

Max nTPM: 78.1
Min nTPM: 48.2
Sample A Female 78.1
Sample B Female 49.7
Sample C Male 48.2
Sample D Male 52.0
Dorsal hippocampus
nTPM: 66.1
Samples: 4

Max nTPM: 87.7
Min nTPM: 47.8
Sample A Female 87.7
Sample B Female 59.5
Sample C Male 69.3
Sample D Male 47.8
Entorhinal cortex
nTPM: 52.3
Samples: 4

Max nTPM: 63.2
Min nTPM: 43.7
Sample A Female 54.5
Sample B Female 63.2
Sample C Male 47.7
Sample D Male 43.7
Ventral hippocampus
nTPM: 62.0
Samples: 4

Max nTPM: 72.3
Min nTPM: 46.8
Sample A Female 72.3
Sample B Female 46.8
Sample C Male 67.3
Sample D Male 61.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.9
Samples: 4

Max nTPM: 98.0
Min nTPM: 83.3
Sample A Male 83.7
Sample B Male 90.6
Sample C Female 98.0
Sample D Female 83.3
Hippocampal formation
nTPM: 108.5
Samples: 4

Max nTPM: 114.6
Min nTPM: 99.7
Sample A Male 114.6
Sample B Male 99.7
Sample C Female 113.4
Sample D Female 106.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71724744 Antisense, RP_050921_01_E12, Mouse strain C57BL/6J (56 days, male) 0.2

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