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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.9
nTPM
Monaco:
103.4
nTPM
Schmiedel:
77.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.9
HPA sample
nTPM
gdT-cell nTPM: 40.7
Samples: 6
Max nTPM: 49.6
Min nTPM: 31.9
P10809_1007
31.9
P10809_1022
41.7
P10809_1041
41.6
P10809_1060
39.6
P10809_1077
39.8
P10809_1098
49.6
MAIT T-cell nTPM: 48.3
Samples: 6
Max nTPM: 63.8
Min nTPM: 38.9
P10809_1006
38.9
P10809_1024
63.8
P10809_1043
43.0
P10809_1062
40.0
P10809_1083
47.6
P10809_1097
56.5
Memory CD4 T-cell nTPM: 45.2
Samples: 6
Max nTPM: 48.8
Min nTPM: 39.4
P10809_1014
47.4
P10809_1026
39.4
P10809_1045
40.6
P10809_1064
48.5
P10809_1086
46.6
P10809_1113
48.8
Memory CD8 T-cell nTPM: 45.4
Samples: 5
Max nTPM: 52.7
Min nTPM: 37.4
P10809_1012
37.4
P10809_1027
48.1
P10809_1046
41.2
P10809_1065
47.5
P10809_1111
52.7
Naive CD4 T-cell nTPM: 34.5
Samples: 6
Max nTPM: 44.2
Min nTPM: 27.8
P10809_1015
30.4
P10809_1030
34.7
P10809_1049
27.8
P10809_1068
37.3
P10809_1085
44.2
P10809_1112
32.3
Naive CD8 T-cell nTPM: 41.9
Samples: 6
Max nTPM: 51.1
Min nTPM: 31.7
P10809_1016
31.7
P10809_1031
48.2
P10809_1050
41.6
P10809_1069
51.1
P10809_1087
46.3
P10809_1110
32.2
T-reg nTPM: 76.9
Samples: 6
Max nTPM: 85.6
Min nTPM: 66.3
P10809_1018
66.3
P10809_1037
85.6
P10809_1056
84.2
P10809_1075
75.7
P10809_1094
77.7
P10809_1106
71.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 79.8
Samples: 4
Max nTPM: 92.3
Min nTPM: 55.9
RHH5202_R3573
83.1
RHH5230_R3602
87.8
RHH5259_R3631
55.9
RHH5288_R3660
92.3
Effector memory CD8 T-cell nTPM: 103.4
Samples: 4
Max nTPM: 150.0
Min nTPM: 55.2
RHH5203_R3574
150.0
RHH5231_R3603
111.6
RHH5260_R3632
55.2
RHH5289_R3661
96.9
MAIT T-cell nTPM: 75.1
Samples: 4
Max nTPM: 87.5
Min nTPM: 57.3
RHH5233_R3605
87.5
RHH5205_R3576
57.3
RHH5262_R3634
74.9
RHH5297_R3663
80.8
Memory CD4 T-cell TFH nTPM: 95.8
Samples: 4
Max nTPM: 107.5
Min nTPM: 88.1
RHH5300_R3666
88.1
RHH5236_R3608
99.1
RHH5265_R3637
107.5
RHH5208_R3579
88.3
Memory CD4 T-cell Th1 nTPM: 73.0
Samples: 4
Max nTPM: 94.6
Min nTPM: 54.0
RHH5210_R3581
81.6
RHH5302_R3668
94.6
RHH5238_R3610
61.6
RHH5267_R3639
54.0
Memory CD4 T-cell Th1/Th17 nTPM: 81.6
Samples: 4
Max nTPM: 123.6
Min nTPM: 56.7
RHH5303_R3669
87.3
RHH5211_R3582
123.6
RHH5239_R3611
56.7
RHH5268_R3640
58.7
Memory CD4 T-cell Th17 nTPM: 81.9
Samples: 4
Max nTPM: 113.5
Min nTPM: 63.5
RHH5304_R3670
83.9
RHH5212_R3583
113.5
RHH5240_R3612
66.8
RHH5269_R3641
63.5
Memory CD4 T-cell Th2 nTPM: 91.2
Samples: 4
Max nTPM: 102.7
Min nTPM: 82.5
RHH5305_R3671
82.5
RHH5213_R3584
95.9
RHH5241_R3613
102.7
RHH5270_R3642
83.7
Naive CD4 T-cell nTPM: 63.9
Samples: 4
Max nTPM: 77.5
Min nTPM: 48.8
RHH5306_R3672
69.5
RHH5214_R3585
77.5
RHH5242_R3614
59.7
RHH5271_R3643
48.8
Naive CD8 T-cell nTPM: 63.5
Samples: 4
Max nTPM: 80.6
Min nTPM: 34.5
RHH5201_R3572
80.6
RHH5229_R3601
34.5
RHH5258_R3630
73.7
RHH5287_R3659
65.0
Non-Vd2 gdTCR nTPM: 78.3
Samples: 4
Max nTPM: 101.4
Min nTPM: 48.7
RHH5235_R3607
48.7
RHH5264_R3636
101.4
RHH5207_R3578
75.6
RHH5299_R3665
87.4
T-reg nTPM: 84.9
Samples: 4
Max nTPM: 110.4
Min nTPM: 65.2
RHH5301_R3667
91.1
RHH5237_R3609
110.4
RHH5266_R3638
65.2
RHH5209_R3580
72.9
Terminal effector memory CD4 T-cell nTPM: 66.2
Samples: 2
Max nTPM: 87.6
Min nTPM: 44.8
RHH5243_R3615
44.8
RHH5272_R3644
87.6
Terminal effector memory CD8 T-cell nTPM: 88.9
Samples: 4
Max nTPM: 100.6
Min nTPM: 73.4
RHH5232_R3604
82.7
RHH5204_R3575
98.7
RHH5261_R3633
73.4
RHH5296_R3662
100.6
Vd2 gdTCR nTPM: 85.9
Samples: 4
Max nTPM: 111.9
Min nTPM: 75.1
RHH5234_R3606
77.7
RHH5206_R3577
111.9
RHH5263_R3635
78.8
RHH5298_R3664
75.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
