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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
86.0
nTPM
Monaco:
273.6
nTPM
Schmiedel:
89.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.0
HPA sample
nTPM
gdT-cell nTPM: 86.0
Samples: 6
Max nTPM: 118.5
Min nTPM: 67.4
P10809_1007
99.6
P10809_1022
82.2
P10809_1041
118.5
P10809_1060
67.4
P10809_1077
67.6
P10809_1098
80.4
MAIT T-cell nTPM: 38.2
Samples: 6
Max nTPM: 53.0
Min nTPM: 23.5
P10809_1006
53.0
P10809_1024
48.2
P10809_1043
24.9
P10809_1062
41.9
P10809_1083
23.5
P10809_1097
37.5
Memory CD4 T-cell nTPM: 66.9
Samples: 6
Max nTPM: 81.6
Min nTPM: 46.2
P10809_1014
81.6
P10809_1026
46.2
P10809_1045
75.9
P10809_1064
71.5
P10809_1086
56.3
P10809_1113
69.7
Memory CD8 T-cell nTPM: 76.5
Samples: 5
Max nTPM: 86.5
Min nTPM: 59.2
P10809_1012
85.1
P10809_1027
59.2
P10809_1046
80.3
P10809_1065
71.5
P10809_1111
86.5
Naive CD4 T-cell nTPM: 77.6
Samples: 6
Max nTPM: 97.4
Min nTPM: 51.7
P10809_1015
97.4
P10809_1030
71.4
P10809_1049
51.7
P10809_1068
90.0
P10809_1085
65.0
P10809_1112
90.1
Naive CD8 T-cell nTPM: 74.4
Samples: 6
Max nTPM: 90.3
Min nTPM: 60.2
P10809_1016
90.3
P10809_1031
60.2
P10809_1050
64.3
P10809_1069
90.3
P10809_1087
64.2
P10809_1110
77.3
T-reg nTPM: 58.8
Samples: 6
Max nTPM: 89.6
Min nTPM: 44.4
P10809_1018
89.6
P10809_1037
54.4
P10809_1056
67.5
P10809_1075
44.4
P10809_1094
47.1
P10809_1106
50.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
273.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 212.7
Samples: 4
Max nTPM: 241.3
Min nTPM: 196.0
RHH5202_R3573
196.0
RHH5230_R3602
196.8
RHH5259_R3631
241.3
RHH5288_R3660
216.8
Effector memory CD8 T-cell nTPM: 243.8
Samples: 4
Max nTPM: 271.9
Min nTPM: 228.3
RHH5203_R3574
271.9
RHH5231_R3603
228.3
RHH5260_R3632
234.7
RHH5289_R3661
240.2
MAIT T-cell nTPM: 127.1
Samples: 4
Max nTPM: 209.6
Min nTPM: 92.7
RHH5233_R3605
96.4
RHH5205_R3576
209.6
RHH5262_R3634
109.5
RHH5297_R3663
92.7
Memory CD4 T-cell TFH nTPM: 237.5
Samples: 4
Max nTPM: 277.2
Min nTPM: 180.6
RHH5300_R3666
226.8
RHH5236_R3608
180.6
RHH5265_R3637
277.2
RHH5208_R3579
265.2
Memory CD4 T-cell Th1 nTPM: 260.3
Samples: 4
Max nTPM: 276.3
Min nTPM: 245.8
RHH5210_R3581
245.8
RHH5302_R3668
246.3
RHH5238_R3610
272.8
RHH5267_R3639
276.3
Memory CD4 T-cell Th1/Th17 nTPM: 195.7
Samples: 4
Max nTPM: 228.8
Min nTPM: 174.1
RHH5303_R3669
174.1
RHH5211_R3582
198.5
RHH5239_R3611
228.8
RHH5268_R3640
181.2
Memory CD4 T-cell Th17 nTPM: 240.0
Samples: 4
Max nTPM: 310.3
Min nTPM: 198.7
RHH5304_R3670
217.0
RHH5212_R3583
198.7
RHH5240_R3612
310.3
RHH5269_R3641
234.1
Memory CD4 T-cell Th2 nTPM: 243.3
Samples: 4
Max nTPM: 289.6
Min nTPM: 188.4
RHH5305_R3671
289.6
RHH5213_R3584
246.1
RHH5241_R3613
188.4
RHH5270_R3642
249.0
Naive CD4 T-cell nTPM: 237.7
Samples: 4
Max nTPM: 269.3
Min nTPM: 206.9
RHH5306_R3672
269.3
RHH5214_R3585
206.9
RHH5242_R3614
226.7
RHH5271_R3643
247.8
Naive CD8 T-cell nTPM: 206.9
Samples: 4
Max nTPM: 215.9
Min nTPM: 188.3
RHH5201_R3572
209.6
RHH5229_R3601
188.3
RHH5258_R3630
213.7
RHH5287_R3659
215.9
Non-Vd2 gdTCR nTPM: 190.2
Samples: 4
Max nTPM: 224.9
Min nTPM: 164.6
RHH5235_R3607
184.3
RHH5264_R3636
164.6
RHH5207_R3578
224.9
RHH5299_R3665
186.8
T-reg nTPM: 204.8
Samples: 4
Max nTPM: 248.5
Min nTPM: 169.2
RHH5301_R3667
206.4
RHH5237_R3609
169.2
RHH5266_R3638
248.5
RHH5209_R3580
194.9
Terminal effector memory CD4 T-cell nTPM: 273.6
Samples: 2
Max nTPM: 276.6
Min nTPM: 270.5
RHH5243_R3615
276.6
RHH5272_R3644
270.5
Terminal effector memory CD8 T-cell nTPM: 243.4
Samples: 4
Max nTPM: 286.6
Min nTPM: 200.5
RHH5232_R3604
250.3
RHH5204_R3575
200.5
RHH5261_R3633
236.3
RHH5296_R3662
286.6
Vd2 gdTCR nTPM: 183.6
Samples: 4
Max nTPM: 232.1
Min nTPM: 151.1
RHH5234_R3606
151.1
RHH5206_R3577
232.1
RHH5263_R3635
186.1
RHH5298_R3664
165.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
