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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
621.0
nTPM
FANTOM5:
26.2
Scaled Tags Per Million
Pig:
10.5
nTPM
Allen mouse:
17.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
621.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 610.9
2090
Male, age 80, both hemispheres
690.2
2188
Female, age 91, both hemispheres
646.0
2301
Female, age 85, both hemispheres
620.9
1984
Male, age 76, both hemispheres
486.3
Dorsal cochlear nucleus nTPM: 567.6
2187
Female, age 91, both hemispheres
661.4
2802
Male, age 74, right hemisphere
609.0
2378
Male, age 80, both hemispheres
544.6
2370
Male, age 61, both hemispheres
537.9
2058
Male, age 76, both hemispheres
484.9
Dorsal tegmental nucleus nTPM: 600.2
2083
Male, age 80, both hemispheres
646.2
2326
Male, age 74, both hemispheres
636.6
2358
Male, age 61, both hemispheres
630.8
1936
Male, age 76, left hemisphere
487.1
Dorsolateral tegmental area nTPM: 578.7
2337
Male, age 61, both hemispheres
790.8
2654
Male, age 80, both hemispheres
623.6
2751
Female, age 85, both hemispheres
538.9
2360
Male, age 74, both hemispheres
472.6
2141
Male, age 76, both hemispheres
467.5
Kolliker-Fuse nucleus nTPM: 601.0
2315
Male, age 76, right hemisphere
623.6
2793
Female, age 91, left hemisphere
601.4
2163
Male, age 80, both hemispheres
577.9
Lateral lemniscal nuclei nTPM: 459.2
2169
Male, age 76, both hemispheres
531.1
2746
Female, age 85, left hemisphere
501.3
2320
Female, age 91, left hemisphere
491.6
2453
Male, age 74, right hemisphere
464.1
2036
Male, age 80, both hemispheres
308.2
Lateral parabrachial nucleus nTPM: 592.6
2792
Male, age 76, both hemispheres
696.0
2013
Male, age 80, both hemispheres
610.9
2139
Female, age 85, right hemisphere
583.2
2790
Male, age 61, both hemispheres
480.3
Lateral vestibular nucleus nTPM: 621.0
2311
Male, age 80, both hemispheres
744.2
2184
Male, age 76, both hemispheres
497.8
Locus coeruleus nTPM: 500.6
2720
Male, age 74, both hemispheres
593.5
2123
Female, age 91, both hemispheres
535.6
2162
Male, age 80, both hemispheres
530.7
2317
Female, age 72, unknown
480.5
2014
Male, age 55, unknown
474.3
2788
Male, age 74, unknown
449.0
1980
Male, age 76, both hemispheres
440.5
Medial parabrachial nucleus nTPM: 580.6
2170
Female, age 91, both hemispheres
718.1
2854
Male, age 80, both hemispheres
602.9
2156
Male, age 61, both hemispheres
561.9
2463
Female, age 85, right hemisphere
513.2
2786
Male, age 76, both hemispheres
507.0
Medial periolivary nuclei nTPM: 515.7
2081
Male, age 80, both hemispheres
577.8
2063
Male, age 76, both hemispheres
555.5
2458
Female, age 91, both hemispheres
533.2
2171
Female, age 85, both hemispheres
487.8
2791
Male, age 74, right hemisphere
424.0
Motor facial nucleus nTPM: 528.6
2126
Male, age 61, both hemispheres
595.3
2697
Female, age 85, both hemispheres
548.1
2062
Male, age 76, both hemispheres
544.9
2365
Male, age 74, right hemisphere
531.2
2795
Female, age 91, both hemispheres
524.1
2327
Male, age 80, both hemispheres
427.7
Motor trigeminal nucleus nTPM: 534.5
2335
Male, age 61, both hemispheres
582.2
2321
Female, age 91, both hemispheres
560.4
2309
Male, age 76, both hemispheres
514.6
2079
Male, age 80, both hemispheres
512.5
2560
Male, age 74, both hemispheres
502.7
Nuclei of the trapezoid body nTPM: 514.3
1983
Male, age 76, both hemispheres
672.3
2166
Male, age 80, both hemispheres
528.3
2159
Male, age 61, both hemispheres
488.8
2368
Female, age 91, both hemispheres
456.5
2735
Female, age 85, both hemispheres
425.4
Nucleus raphe magnus nTPM: 495.7
2051
Male, age 76, both hemispheres
524.1
2328
Male, age 80, both hemispheres
510.0
2459
Female, age 91, both hemispheres
506.7
2455
Male, age 74, both hemispheres
502.7
2172
Female, age 85, both hemispheres
474.9
2160
Male, age 61, both hemispheres
456.0
Paramedian reticular nucleus nTPM: 530.0
2052
Male, age 76, both hemispheres
561.3
2313
Male, age 61, both hemispheres
532.5
2057
Male, age 80, both hemispheres
522.6
2050
Female, age 85, both hemispheres
503.8
Pedunculopontine tegmental nucleus nTPM: 561.1
2338
Male, age 61, both hemispheres
695.2
2334
Male, age 80, both hemispheres
587.5
1921
Female, age 85, both hemispheres
400.5
Pontine nuclei nTPM: 532.5
2319
Female, age 91, both hemispheres
594.6
1968
Male, age 76, left hemisphere
567.4
2115
Male, age 80, left hemisphere
567.2
1863
Male, age 55, unknown
545.2
2109
Female, age 72, unknown
519.2
2787
Female, age 85, both hemispheres
517.6
2454
Male, age 74, left hemisphere
509.5
2727
Male, age 61, right hemisphere
439.7
Pontine raphe nucleus nTPM: 476.1
2122
Female, age 85, midline
486.7
2853
Male, age 76, midline
465.4
Posteroventral cochlear nucleus nTPM: 616.5
2341
Male, age 80, both hemispheres
738.0
2135
Female, age 91, both hemispheres
692.8
2371
Male, age 61, both hemispheres
591.4
2070
Male, age 76, both hemispheres
562.5
2752
Female, age 85, both hemispheres
497.7
Principal sensory trigeminal nucleus nTPM: 484.0
2367
Female, age 91, left hemisphere
532.4
2324
Male, age 76, both hemispheres
527.5
2158
Male, age 61, both hemispheres
477.3
2008
Male, age 80, left hemisphere
398.9
Reticular pontine nucleus, caudal nTPM: 530.7
2092
Male, age 76, both hemispheres
597.3
2559
Male, age 74, both hemispheres
554.0
2457
Female, age 91, both hemispheres
552.3
2332
Male, age 80, right hemisphere
419.2
Reticular pontine nucleus, oral nTPM: 526.9
2366
Female, age 91, both hemispheres
595.6
2167
Male, age 76, both hemispheres
558.8
1939
Male, age 80, both hemispheres
538.4
2361
Male, age 74, both hemispheres
490.5
2012
Female, age 85, both hemispheres
451.4
Reticulotegmental nucleus nTPM: 543.3
2452
Male, age 74, both hemispheres
592.0
2322
Female, age 91, both hemispheres
575.9
2333
Male, age 80, both hemispheres
531.0
2325
Male, age 76, both hemispheres
474.0
Spinal trigeminal nucleus, oral nTPM: 499.9
2164
Male, age 80, both hemispheres
564.8
1978
Male, age 76, both hemispheres
498.6
2737
Female, age 85, both hemispheres
436.2
Subcoeruleus area nTPM: 514.8
2451
Male, age 74, both hemispheres
598.5
2369
Female, age 85, left hemisphere
547.1
1958
Male, age 80, both hemispheres
488.9
2089
Male, age 76, left hemisphere
471.2
2323
Female, age 91, left hemisphere
468.3
Superior olive nTPM: 497.6
2020
Male, age 76, both hemispheres
580.0
2561
Female, age 91, both hemispheres
531.8
2364
Male, age 74, right hemisphere
482.4
2329
Male, age 80, right hemisphere
475.5
1875
Female, age 85, both hemispheres
418.3
Ventral periolivary nuclei nTPM: 514.4
2023
Male, age 76, both hemispheres
579.4
2165
Male, age 80, both hemispheres
514.8
2794
Female, age 91, left hemisphere
485.5
2130
Female, age 85, both hemispheres
477.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 514.8
2161
Male, age 80, both hemispheres
552.0
2840
Female, age 85, both hemispheres
551.3
2359
Male, age 61, both hemispheres
518.3
1959
Male, age 76, both hemispheres
514.5
2456
Female, age 91, both hemispheres
483.9
2449
Male, age 74, both hemispheres
468.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
10.5
Pig sample
Sample description
nTPM
Pons nTPM: 10.5
Samples: 4
Max nTPM: 14.0
Min nTPM: 7.6
Sample A
Female
9.0
Sample B
Female
14.0
Sample C
Male
7.6
Sample D
Male
11.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
