HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:54.6 nTPM
HPA Brain:72.6 nTPM
GTEx:54.6 nTPM
FANTOM5:93.6 Scaled Tags Per Million
Pig:44.9 nTPM
Mouse:26.3 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024592
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.6
Sample id Sample description nTPM
Hippocampus
nTPM: 68.6
2529 Female, age 94, left hemisphere 71.8
2621 Female, age 67, right hemisphere 71.7
1898 Male, age 80, left hemisphere 69.9
2148 Female, age 91, left hemisphere 68.6
1855 Male, age 76, left hemisphere 65.8
1911 Female, age 85, right hemisphere 64.1
Dentate gyrus
nTPM: 68.9
2530 Female, age 94, left hemisphere 93.0
2010 Male, age 76, both hemispheres 78.2
2531 Female, age 67, both hemispheres 64.5
2246 Female, age 85, both hemispheres 63.1
2528 Male, age 74, both hemispheres 59.3
1927 Female, age 91, both hemispheres 55.0
Entorhinal gyrus
nTPM: 70.3
2686 Male, age 75, right hemisphere 90.5
2117 Female, age 91, right hemisphere 81.1
2764 Male, age 80, right hemisphere 64.9
2613 Female, age 94, left hemisphere 62.1
1938 Female, age 85, left hemisphere 61.9
1787 Male, age 76, left hemisphere 61.5
Hippocampus, CA1
nTPM: 60.1
1873 Female, age 85, both hemispheres 68.9
2082 Female, age 91, right hemisphere 59.5
2045 Male, age 76, both hemispheres 58.4
2527 Male, age 74, both hemispheres 58.4
2749 Male, age 80, left hemisphere 55.3
Hippocampus, CA2
nTPM: 65.3
1963 Male, age 80, left hemisphere 74.9
1892 Male, age 76, both hemispheres 66.2
2437 Female, age 94, left hemisphere 65.9
2113 Female, age 91, right hemisphere 65.2
1940 Female, age 85, left hemisphere 63.0
2249 Male, age 74, both hemispheres 56.5
Hippocampus, CA3
nTPM: 59.0
1891 Female, age 85, both hemispheres 70.7
2861 Female, age 67, both hemispheres 68.1
1867 Male, age 76, both hemispheres 64.2
2137 Male, age 80, left hemisphere 54.8
2620 Female, age 94, left hemisphere 52.3
2436 Male, age 74, both hemispheres 44.1
Parahippocampal cortex
nTPM: 62.5
2692 Male, age 74, both hemispheres 75.4
2532 Female, age 72, left hemisphere 68.2
2018 Male, age 76, both hemispheres 67.8
2622 Female, age 67, right hemisphere 64.9
2245 Female, age 91, both hemispheres 64.4
1850 Male, age 80, both hemispheres 63.1
1990 Female, age 91, right hemisphere 60.0
1933 Female, age 85, both hemispheres 58.4
2250 Female, age 67, right hemisphere 51.7
2693 Female, age 94, both hemispheres 50.7
Perirhinal gyrus
nTPM: 54.6
2848 Male, age 76, right hemisphere 63.6
1794 Male, age 80, right hemisphere 55.4
1841 Female, age 85, right hemisphere 55.4
1847 Female, age 91, left hemisphere 55.1
2521 Female, age 94, right hemisphere 43.5
Subiculum
nTPM: 72.6
2438 Female, age 94, left hemisphere 92.5
2042 Male, age 76, both hemispheres 81.1
1901 Male, age 80, both hemispheres 68.7
2729 Female, age 91, right hemisphere 66.3
1977 Female, age 85, both hemispheres 64.6
2619 Male, age 74, both hemispheres 62.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.6
Samples: 197

Max nTPM: 167.5
Min nTPM: 13.5
Std nTPM: 25.2
Median nTPM: 47.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 167.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 158.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 157.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 135.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 119.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 113.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 110.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 107.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 105.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 99.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 99.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.6
FF:10153-102I9 76 years, female 93.8
FF:10169-103B7 60 years, female 93.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.9
Pig sample Sample description nTPM
Subiculum
nTPM: 41.1
Samples: 4

Max nTPM: 47.5
Min nTPM: 37.8
Sample A Female 47.5
Sample B Female 39.5
Sample C Male 39.6
Sample D Male 37.8
Dorsal hippocampus
nTPM: 44.9
Samples: 4

Max nTPM: 50.5
Min nTPM: 38.6
Sample A Female 50.5
Sample B Female 44.5
Sample C Male 45.9
Sample D Male 38.6
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 42.8
Min nTPM: 35.3
Sample A Female 42.8
Sample B Female 35.4
Sample C Male 35.3
Sample D Male 35.5
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 52.7
Min nTPM: 34.6
Sample A Female 40.7
Sample B Female 34.6
Sample C Male 52.7
Sample D Male 49.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 26.9
Min nTPM: 24.9
Sample A Male 25.8
Sample B Male 24.9
Sample C Female 26.4
Sample D Female 26.9
Hippocampal formation
nTPM: 26.3
Samples: 4

Max nTPM: 28.5
Min nTPM: 24.7
Sample A Male 25.3
Sample B Male 28.5
Sample C Female 26.8
Sample D Female 24.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69540387 Antisense, RP_050426_01_F09, Mouse strain C57BL/6J (56 days, male) 1.1

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