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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
592.1
nTPM
FANTOM5:
406.2
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
592.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 545.4
2188
Female, age 91, both hemispheres
671.8
2090
Male, age 80, both hemispheres
532.7
2301
Female, age 85, both hemispheres
528.7
1984
Male, age 76, both hemispheres
448.6
Dorsal cochlear nucleus nTPM: 514.1
2378
Male, age 80, both hemispheres
581.3
2802
Male, age 74, right hemisphere
543.1
2370
Male, age 61, both hemispheres
511.0
2058
Male, age 76, both hemispheres
493.1
2187
Female, age 91, both hemispheres
442.1
Dorsal tegmental nucleus nTPM: 420.6
2083
Male, age 80, both hemispheres
600.3
2326
Male, age 74, both hemispheres
438.3
1936
Male, age 76, left hemisphere
334.4
2358
Male, age 61, both hemispheres
309.3
Dorsolateral tegmental area nTPM: 412.1
2654
Male, age 80, both hemispheres
631.8
2751
Female, age 85, both hemispheres
521.7
2337
Male, age 61, both hemispheres
386.6
2360
Male, age 74, both hemispheres
285.1
2141
Male, age 76, both hemispheres
235.2
Kolliker-Fuse nucleus nTPM: 535.8
2793
Female, age 91, left hemisphere
755.9
2163
Male, age 80, both hemispheres
502.6
2315
Male, age 76, right hemisphere
348.8
Lateral lemniscal nuclei nTPM: 537.7
2169
Male, age 76, both hemispheres
648.6
2036
Male, age 80, both hemispheres
578.1
2320
Female, age 91, left hemisphere
559.7
2746
Female, age 85, left hemisphere
483.7
2453
Male, age 74, right hemisphere
418.3
Lateral parabrachial nucleus nTPM: 530.4
2792
Male, age 76, both hemispheres
721.8
2013
Male, age 80, both hemispheres
559.0
2139
Female, age 85, right hemisphere
483.5
2790
Male, age 61, both hemispheres
357.3
Lateral vestibular nucleus nTPM: 481.9
2311
Male, age 80, both hemispheres
508.9
2184
Male, age 76, both hemispheres
455.0
Locus coeruleus nTPM: 251.4
2720
Male, age 74, both hemispheres
364.8
2162
Male, age 80, both hemispheres
337.8
2317
Female, age 72, unknown
242.1
2123
Female, age 91, both hemispheres
224.6
2014
Male, age 55, unknown
218.5
2788
Male, age 74, unknown
204.1
1980
Male, age 76, both hemispheres
168.3
Medial parabrachial nucleus nTPM: 473.4
2463
Female, age 85, right hemisphere
576.0
2854
Male, age 80, both hemispheres
534.1
2170
Female, age 91, both hemispheres
446.4
2786
Male, age 76, both hemispheres
417.5
2156
Male, age 61, both hemispheres
392.8
Medial periolivary nuclei nTPM: 464.0
2063
Male, age 76, both hemispheres
571.2
2081
Male, age 80, both hemispheres
516.9
2458
Female, age 91, both hemispheres
473.1
2171
Female, age 85, both hemispheres
432.7
2791
Male, age 74, right hemisphere
326.2
Motor facial nucleus nTPM: 507.4
2697
Female, age 85, both hemispheres
696.9
2062
Male, age 76, both hemispheres
565.6
2126
Male, age 61, both hemispheres
485.8
2795
Female, age 91, both hemispheres
457.4
2327
Male, age 80, both hemispheres
443.9
2365
Male, age 74, right hemisphere
395.0
Motor trigeminal nucleus nTPM: 459.0
2079
Male, age 80, both hemispheres
532.9
2560
Male, age 74, both hemispheres
476.3
2321
Female, age 91, both hemispheres
439.1
2309
Male, age 76, both hemispheres
435.7
2335
Male, age 61, both hemispheres
411.0
Nuclei of the trapezoid body nTPM: 499.1
2159
Male, age 61, both hemispheres
604.4
2166
Male, age 80, both hemispheres
554.4
1983
Male, age 76, both hemispheres
522.2
2368
Female, age 91, both hemispheres
456.4
2735
Female, age 85, both hemispheres
358.1
Nucleus raphe magnus nTPM: 464.2
2051
Male, age 76, both hemispheres
561.3
2328
Male, age 80, both hemispheres
550.7
2459
Female, age 91, both hemispheres
487.3
2160
Male, age 61, both hemispheres
457.6
2172
Female, age 85, both hemispheres
387.3
2455
Male, age 74, both hemispheres
340.9
Paramedian reticular nucleus nTPM: 460.6
2050
Female, age 85, both hemispheres
502.1
2057
Male, age 80, both hemispheres
490.5
2052
Male, age 76, both hemispheres
438.6
2313
Male, age 61, both hemispheres
411.0
Pedunculopontine tegmental nucleus nTPM: 421.8
2334
Male, age 80, both hemispheres
461.3
1921
Female, age 85, both hemispheres
416.6
2338
Male, age 61, both hemispheres
387.4
Pontine nuclei nTPM: 550.8
1863
Male, age 55, unknown
667.5
1968
Male, age 76, left hemisphere
609.5
2319
Female, age 91, both hemispheres
599.6
2109
Female, age 72, unknown
534.2
2787
Female, age 85, both hemispheres
522.8
2115
Male, age 80, left hemisphere
513.9
2454
Male, age 74, left hemisphere
506.2
2727
Male, age 61, right hemisphere
452.9
Pontine raphe nucleus nTPM: 385.8
2122
Female, age 85, midline
453.7
2853
Male, age 76, midline
318.0
Posteroventral cochlear nucleus nTPM: 592.1
2341
Male, age 80, both hemispheres
748.6
2135
Female, age 91, both hemispheres
708.7
2371
Male, age 61, both hemispheres
564.8
2070
Male, age 76, both hemispheres
501.3
2752
Female, age 85, both hemispheres
437.2
Principal sensory trigeminal nucleus nTPM: 466.3
2367
Female, age 91, left hemisphere
542.7
2158
Male, age 61, both hemispheres
466.4
2008
Male, age 80, left hemisphere
437.3
2324
Male, age 76, both hemispheres
418.8
Reticular pontine nucleus, caudal nTPM: 544.9
2092
Male, age 76, both hemispheres
612.7
2457
Female, age 91, both hemispheres
596.6
2559
Male, age 74, both hemispheres
497.8
2332
Male, age 80, right hemisphere
472.5
Reticular pontine nucleus, oral nTPM: 543.1
2366
Female, age 91, both hemispheres
776.4
1939
Male, age 80, both hemispheres
540.8
2012
Female, age 85, both hemispheres
512.6
2167
Male, age 76, both hemispheres
470.6
2361
Male, age 74, both hemispheres
415.1
Reticulotegmental nucleus nTPM: 462.0
2333
Male, age 80, both hemispheres
517.5
2452
Male, age 74, both hemispheres
510.7
2322
Female, age 91, both hemispheres
464.1
2325
Male, age 76, both hemispheres
355.5
Spinal trigeminal nucleus, oral nTPM: 452.0
2164
Male, age 80, both hemispheres
508.1
1978
Male, age 76, both hemispheres
460.9
2737
Female, age 85, both hemispheres
386.9
Subcoeruleus area nTPM: 480.4
2369
Female, age 85, left hemisphere
608.8
2089
Male, age 76, left hemisphere
501.5
1958
Male, age 80, both hemispheres
481.1
2451
Male, age 74, both hemispheres
469.7
2323
Female, age 91, left hemisphere
341.0
Superior olive nTPM: 534.9
2020
Male, age 76, both hemispheres
726.5
1875
Female, age 85, both hemispheres
532.9
2561
Female, age 91, both hemispheres
529.7
2329
Male, age 80, right hemisphere
526.0
2364
Male, age 74, right hemisphere
359.2
Ventral periolivary nuclei nTPM: 504.8
2023
Male, age 76, both hemispheres
681.6
2165
Male, age 80, both hemispheres
520.3
2130
Female, age 85, both hemispheres
417.6
2794
Female, age 91, left hemisphere
399.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 481.9
1959
Male, age 76, both hemispheres
556.6
2161
Male, age 80, both hemispheres
548.1
2840
Female, age 85, both hemispheres
522.9
2456
Female, age 91, both hemispheres
521.5
2359
Male, age 61, both hemispheres
397.1
2449
Male, age 74, both hemispheres
344.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
