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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
195.8
nTPM
Monaco:
260.7
nTPM
Schmiedel:
216.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
195.8
HPA sample
nTPM
gdT-cell nTPM: 195.8
Samples: 6
Max nTPM: 218.8
Min nTPM: 169.5
P10809_1007
169.5
P10809_1022
218.8
P10809_1041
208.6
P10809_1060
187.9
P10809_1077
202.1
P10809_1098
187.9
MAIT T-cell nTPM: 153.8
Samples: 6
Max nTPM: 168.0
Min nTPM: 134.9
P10809_1006
134.9
P10809_1024
145.4
P10809_1043
168.0
P10809_1062
159.3
P10809_1083
149.4
P10809_1097
165.7
Memory CD4 T-cell nTPM: 148.5
Samples: 6
Max nTPM: 179.7
Min nTPM: 127.0
P10809_1014
127.4
P10809_1026
144.6
P10809_1045
142.7
P10809_1064
169.7
P10809_1086
179.7
P10809_1113
127.0
Memory CD8 T-cell nTPM: 195.8
Samples: 5
Max nTPM: 223.0
Min nTPM: 169.7
P10809_1012
169.7
P10809_1027
175.7
P10809_1046
207.6
P10809_1065
223.0
P10809_1111
202.8
Naive CD4 T-cell nTPM: 103.6
Samples: 6
Max nTPM: 125.1
Min nTPM: 79.1
P10809_1015
79.1
P10809_1030
110.1
P10809_1049
115.3
P10809_1068
91.2
P10809_1085
125.1
P10809_1112
100.5
Naive CD8 T-cell nTPM: 152.7
Samples: 6
Max nTPM: 224.0
Min nTPM: 105.7
P10809_1016
105.7
P10809_1031
126.6
P10809_1050
161.0
P10809_1069
190.1
P10809_1087
224.0
P10809_1110
108.9
T-reg nTPM: 153.4
Samples: 6
Max nTPM: 168.7
Min nTPM: 137.3
P10809_1018
148.7
P10809_1037
144.7
P10809_1056
157.9
P10809_1075
168.7
P10809_1094
163.3
P10809_1106
137.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
260.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 169.6
Samples: 4
Max nTPM: 220.7
Min nTPM: 124.1
RHH5202_R3573
167.8
RHH5230_R3602
165.8
RHH5259_R3631
124.1
RHH5288_R3660
220.7
Effector memory CD8 T-cell nTPM: 259.5
Samples: 4
Max nTPM: 288.9
Min nTPM: 222.1
RHH5203_R3574
253.5
RHH5231_R3603
288.9
RHH5260_R3632
222.1
RHH5289_R3661
273.4
MAIT T-cell nTPM: 180.9
Samples: 4
Max nTPM: 200.2
Min nTPM: 157.0
RHH5233_R3605
177.6
RHH5205_R3576
157.0
RHH5262_R3634
188.8
RHH5297_R3663
200.2
Memory CD4 T-cell TFH nTPM: 169.3
Samples: 4
Max nTPM: 230.6
Min nTPM: 132.7
RHH5300_R3666
142.6
RHH5236_R3608
230.6
RHH5265_R3637
171.2
RHH5208_R3579
132.7
Memory CD4 T-cell Th1 nTPM: 152.3
Samples: 4
Max nTPM: 187.3
Min nTPM: 131.1
RHH5210_R3581
131.1
RHH5302_R3668
187.3
RHH5238_R3610
138.2
RHH5267_R3639
152.4
Memory CD4 T-cell Th1/Th17 nTPM: 164.2
Samples: 4
Max nTPM: 229.2
Min nTPM: 113.5
RHH5303_R3669
229.2
RHH5211_R3582
166.5
RHH5239_R3611
113.5
RHH5268_R3640
147.6
Memory CD4 T-cell Th17 nTPM: 150.4
Samples: 4
Max nTPM: 176.8
Min nTPM: 120.9
RHH5304_R3670
176.8
RHH5212_R3583
157.8
RHH5240_R3612
146.0
RHH5269_R3641
120.9
Memory CD4 T-cell Th2 nTPM: 156.2
Samples: 4
Max nTPM: 173.7
Min nTPM: 145.1
RHH5305_R3671
156.8
RHH5213_R3584
145.1
RHH5241_R3613
173.7
RHH5270_R3642
149.3
Naive CD4 T-cell nTPM: 157.6
Samples: 4
Max nTPM: 160.0
Min nTPM: 151.1
RHH5306_R3672
151.1
RHH5214_R3585
159.3
RHH5242_R3614
159.9
RHH5271_R3643
160.0
Naive CD8 T-cell nTPM: 142.3
Samples: 4
Max nTPM: 170.0
Min nTPM: 89.8
RHH5201_R3572
155.5
RHH5229_R3601
89.8
RHH5258_R3630
170.0
RHH5287_R3659
153.9
Non-Vd2 gdTCR nTPM: 237.4
Samples: 4
Max nTPM: 290.8
Min nTPM: 196.3
RHH5235_R3607
196.3
RHH5264_R3636
290.8
RHH5207_R3578
226.6
RHH5299_R3665
236.0
T-reg nTPM: 158.8
Samples: 4
Max nTPM: 192.9
Min nTPM: 135.7
RHH5301_R3667
147.9
RHH5237_R3609
192.9
RHH5266_R3638
158.6
RHH5209_R3580
135.7
Terminal effector memory CD4 T-cell nTPM: 238.4
Samples: 2
Max nTPM: 254.2
Min nTPM: 222.5
RHH5243_R3615
222.5
RHH5272_R3644
254.2
Terminal effector memory CD8 T-cell nTPM: 260.7
Samples: 4
Max nTPM: 291.0
Min nTPM: 213.5
RHH5232_R3604
287.5
RHH5204_R3575
250.7
RHH5261_R3633
213.5
RHH5296_R3662
291.0
Vd2 gdTCR nTPM: 209.4
Samples: 4
Max nTPM: 228.3
Min nTPM: 174.5
RHH5234_R3606
214.8
RHH5206_R3577
228.3
RHH5263_R3635
219.9
RHH5298_R3664
174.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
