HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:60.7 nTPM
HPA Brain:185.4 nTPM
GTEx:60.7 nTPM
FANTOM5:1075.6 Scaled Tags Per Million
Pig:206.0 nTPM
Mouse:325.1 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020043Antibody CAB005868
Glial cells Not detectedLow
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 185.4
Sample id Sample description nTPM
Hippocampus
nTPM: 161.1
2621 Female, age 67, right hemisphere 198.9
1911 Female, age 85, right hemisphere 170.6
2148 Female, age 91, left hemisphere 155.6
1898 Male, age 80, left hemisphere 150.3
2529 Female, age 94, left hemisphere 147.8
1855 Male, age 76, left hemisphere 143.4
Dentate gyrus
nTPM: 146.5
2531 Female, age 67, both hemispheres 178.9
2246 Female, age 85, both hemispheres 167.6
1927 Female, age 91, both hemispheres 143.9
2010 Male, age 76, both hemispheres 143.8
2530 Female, age 94, left hemisphere 130.0
2528 Male, age 74, both hemispheres 114.8
Entorhinal gyrus
nTPM: 153.4
2686 Male, age 75, right hemisphere 191.3
2613 Female, age 94, left hemisphere 179.6
1938 Female, age 85, left hemisphere 154.5
2117 Female, age 91, right hemisphere 135.4
2764 Male, age 80, right hemisphere 132.8
1787 Male, age 76, left hemisphere 127.0
Hippocampus, CA1
nTPM: 160.2
2749 Male, age 80, left hemisphere 192.7
1873 Female, age 85, both hemispheres 173.0
2045 Male, age 76, both hemispheres 160.5
2527 Male, age 74, both hemispheres 146.7
2082 Female, age 91, right hemisphere 128.0
Hippocampus, CA2
nTPM: 142.8
1892 Male, age 76, both hemispheres 160.8
1940 Female, age 85, left hemisphere 157.4
2437 Female, age 94, left hemisphere 142.8
1963 Male, age 80, left hemisphere 136.3
2113 Female, age 91, right hemisphere 131.0
2249 Male, age 74, both hemispheres 128.2
Hippocampus, CA3
nTPM: 185.4
2620 Female, age 94, left hemisphere 216.8
2436 Male, age 74, both hemispheres 214.6
1867 Male, age 76, both hemispheres 185.2
2137 Male, age 80, left hemisphere 183.1
2861 Female, age 67, both hemispheres 162.3
1891 Female, age 85, both hemispheres 150.3
Parahippocampal cortex
nTPM: 167.1
2693 Female, age 94, both hemispheres 207.8
2622 Female, age 67, right hemisphere 205.6
1850 Male, age 80, both hemispheres 180.1
2245 Female, age 91, both hemispheres 168.3
2532 Female, age 72, left hemisphere 167.6
1933 Female, age 85, both hemispheres 162.5
2692 Male, age 74, both hemispheres 157.2
2018 Male, age 76, both hemispheres 153.1
2250 Female, age 67, right hemisphere 141.7
1990 Female, age 91, right hemisphere 126.7
Perirhinal gyrus
nTPM: 156.1
1841 Female, age 85, right hemisphere 195.5
2521 Female, age 94, right hemisphere 163.1
1794 Male, age 80, right hemisphere 150.7
1847 Female, age 91, left hemisphere 144.8
2848 Male, age 76, right hemisphere 126.6
Subiculum
nTPM: 161.0
2042 Male, age 76, both hemispheres 197.9
2438 Female, age 94, left hemisphere 170.8
1901 Male, age 80, both hemispheres 170.1
1977 Female, age 85, both hemispheres 150.0
2619 Male, age 74, both hemispheres 147.8
2729 Female, age 91, right hemisphere 129.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.7
Samples: 197

Max nTPM: 108.8
Min nTPM: 30.3
Std nTPM: 16.3
Median nTPM: 58.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 108.8
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 104.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 100.4
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 99.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 97.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 97.5
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 96.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 95.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 95.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 93.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 93.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1075.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1075.6
FF:10169-103B7 60 years, female 1333.5
FF:10153-102I9 76 years, female 817.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 206.0
Pig sample Sample description nTPM
Subiculum
nTPM: 195.3
Samples: 4

Max nTPM: 199.8
Min nTPM: 189.7
Sample A Female 199.8
Sample B Female 197.3
Sample C Male 194.3
Sample D Male 189.7
Dorsal hippocampus
nTPM: 206.0
Samples: 4

Max nTPM: 232.2
Min nTPM: 185.7
Sample A Female 185.7
Sample B Female 204.6
Sample C Male 201.5
Sample D Male 232.2
Entorhinal cortex
nTPM: 188.0
Samples: 4

Max nTPM: 204.1
Min nTPM: 178.6
Sample A Female 189.9
Sample B Female 204.1
Sample C Male 178.6
Sample D Male 179.3
Ventral hippocampus
nTPM: 199.8
Samples: 4

Max nTPM: 225.6
Min nTPM: 175.3
Sample A Female 188.6
Sample B Female 209.6
Sample C Male 175.3
Sample D Male 225.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 325.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 317.5
Samples: 4

Max nTPM: 328.0
Min nTPM: 306.8
Sample A Male 312.9
Sample B Male 328.0
Sample C Female 306.8
Sample D Female 322.1
Hippocampal formation
nTPM: 325.2
Samples: 4

Max nTPM: 348.1
Min nTPM: 297.8
Sample A Male 306.8
Sample B Male 347.9
Sample C Female 348.1
Sample D Female 297.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
341 Antisense, RP_Baylor_102725, Mouse strain C57BL/6J (56 days, male) 10.3
340 Antisense, RP_Baylor_102725, Mouse strain C57BL/6J (56 days, male) 9.9
342 Sense, RPS_Baylor_36977, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org