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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.4
nTPM
Monaco:
440.0
nTPM
Schmiedel:
551.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.4
HPA sample
nTPM
gdT-cell nTPM: 88.4
Samples: 6
Max nTPM: 101.6
Min nTPM: 71.7
P10809_1007
91.7
P10809_1022
90.6
P10809_1041
101.6
P10809_1060
75.0
P10809_1077
71.7
P10809_1098
99.7
MAIT T-cell nTPM: 65.3
Samples: 6
Max nTPM: 83.7
Min nTPM: 53.7
P10809_1006
83.7
P10809_1024
58.4
P10809_1043
70.5
P10809_1062
63.4
P10809_1083
62.1
P10809_1097
53.7
Memory CD4 T-cell nTPM: 73.6
Samples: 6
Max nTPM: 82.5
Min nTPM: 64.8
P10809_1014
76.0
P10809_1026
78.6
P10809_1045
82.5
P10809_1064
68.8
P10809_1086
64.8
P10809_1113
71.1
Memory CD8 T-cell nTPM: 74.1
Samples: 5
Max nTPM: 88.1
Min nTPM: 64.1
P10809_1012
88.1
P10809_1027
64.1
P10809_1046
87.2
P10809_1065
64.2
P10809_1111
67.1
Naive CD4 T-cell nTPM: 79.3
Samples: 6
Max nTPM: 93.8
Min nTPM: 66.8
P10809_1015
69.9
P10809_1030
75.4
P10809_1049
66.8
P10809_1068
93.4
P10809_1085
76.2
P10809_1112
93.8
Naive CD8 T-cell nTPM: 70.1
Samples: 6
Max nTPM: 81.7
Min nTPM: 53.5
P10809_1016
66.6
P10809_1031
81.7
P10809_1050
64.0
P10809_1069
77.5
P10809_1087
53.5
P10809_1110
77.5
T-reg nTPM: 63.8
Samples: 6
Max nTPM: 75.4
Min nTPM: 57.8
P10809_1018
57.8
P10809_1037
66.2
P10809_1056
75.4
P10809_1075
64.5
P10809_1094
60.0
P10809_1106
58.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
440.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 299.8
Samples: 4
Max nTPM: 380.2
Min nTPM: 226.7
RHH5202_R3573
226.7
RHH5230_R3602
319.4
RHH5259_R3631
380.2
RHH5288_R3660
272.9
Effector memory CD8 T-cell nTPM: 341.4
Samples: 4
Max nTPM: 435.6
Min nTPM: 268.2
RHH5203_R3574
268.2
RHH5231_R3603
348.7
RHH5260_R3632
435.6
RHH5289_R3661
312.9
MAIT T-cell nTPM: 282.8
Samples: 4
Max nTPM: 339.4
Min nTPM: 245.0
RHH5233_R3605
262.5
RHH5205_R3576
339.4
RHH5262_R3634
284.4
RHH5297_R3663
245.0
Memory CD4 T-cell TFH nTPM: 421.0
Samples: 4
Max nTPM: 502.0
Min nTPM: 358.8
RHH5300_R3666
401.2
RHH5236_R3608
502.0
RHH5265_R3637
422.1
RHH5208_R3579
358.8
Memory CD4 T-cell Th1 nTPM: 389.5
Samples: 4
Max nTPM: 454.7
Min nTPM: 315.2
RHH5210_R3581
349.3
RHH5302_R3668
315.2
RHH5238_R3610
454.7
RHH5267_R3639
438.9
Memory CD4 T-cell Th1/Th17 nTPM: 397.6
Samples: 4
Max nTPM: 493.6
Min nTPM: 317.8
RHH5303_R3669
317.8
RHH5211_R3582
378.3
RHH5239_R3611
493.6
RHH5268_R3640
400.5
Memory CD4 T-cell Th17 nTPM: 418.0
Samples: 4
Max nTPM: 471.3
Min nTPM: 345.6
RHH5304_R3670
345.6
RHH5212_R3583
404.3
RHH5240_R3612
450.8
RHH5269_R3641
471.3
Memory CD4 T-cell Th2 nTPM: 365.2
Samples: 4
Max nTPM: 416.3
Min nTPM: 303.1
RHH5305_R3671
361.2
RHH5213_R3584
380.2
RHH5241_R3613
303.1
RHH5270_R3642
416.3
Naive CD4 T-cell nTPM: 409.1
Samples: 4
Max nTPM: 421.7
Min nTPM: 397.8
RHH5306_R3672
405.7
RHH5214_R3585
397.8
RHH5242_R3614
411.2
RHH5271_R3643
421.7
Naive CD8 T-cell nTPM: 334.6
Samples: 4
Max nTPM: 443.4
Min nTPM: 251.3
RHH5201_R3572
251.3
RHH5229_R3601
443.4
RHH5258_R3630
306.2
RHH5287_R3659
337.3
Non-Vd2 gdTCR nTPM: 329.2
Samples: 4
Max nTPM: 378.2
Min nTPM: 271.3
RHH5235_R3607
378.2
RHH5264_R3636
271.3
RHH5207_R3578
358.9
RHH5299_R3665
308.5
T-reg nTPM: 357.9
Samples: 4
Max nTPM: 429.3
Min nTPM: 291.2
RHH5301_R3667
291.2
RHH5237_R3609
429.3
RHH5266_R3638
351.7
RHH5209_R3580
359.3
Terminal effector memory CD4 T-cell nTPM: 440.0
Samples: 2
Max nTPM: 518.1
Min nTPM: 361.9
RHH5243_R3615
518.1
RHH5272_R3644
361.9
Terminal effector memory CD8 T-cell nTPM: 364.9
Samples: 4
Max nTPM: 470.8
Min nTPM: 302.4
RHH5232_R3604
366.8
RHH5204_R3575
302.4
RHH5261_R3633
470.8
RHH5296_R3662
319.5
Vd2 gdTCR nTPM: 321.3
Samples: 4
Max nTPM: 379.9
Min nTPM: 269.8
RHH5234_R3606
269.8
RHH5206_R3577
344.3
RHH5263_R3635
379.9
RHH5298_R3664
291.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
