HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:86.4 nTPM
HPA Brain:114.2 nTPM
GTEx:86.4 nTPM
FANTOM5:99.1 Scaled Tags Per Million
Pig:143.7 nTPM
Mouse:132.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003426
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.2
Sample id Sample description nTPM
Hippocampus
nTPM: 113.7
1898 Male, age 80, left hemisphere 118.9
2529 Female, age 94, left hemisphere 118.3
1855 Male, age 76, left hemisphere 116.7
1911 Female, age 85, right hemisphere 110.7
2621 Female, age 67, right hemisphere 110.2
2148 Female, age 91, left hemisphere 107.6
Dentate gyrus
nTPM: 101.0
2530 Female, age 94, left hemisphere 112.2
2246 Female, age 85, both hemispheres 109.4
2010 Male, age 76, both hemispheres 103.5
1927 Female, age 91, both hemispheres 99.5
2528 Male, age 74, both hemispheres 96.9
2531 Female, age 67, both hemispheres 84.6
Entorhinal gyrus
nTPM: 105.1
2117 Female, age 91, right hemisphere 127.1
1938 Female, age 85, left hemisphere 116.5
1787 Male, age 76, left hemisphere 108.9
2764 Male, age 80, right hemisphere 104.2
2613 Female, age 94, left hemisphere 88.1
2686 Male, age 75, right hemisphere 85.5
Hippocampus, CA1
nTPM: 104.8
2749 Male, age 80, left hemisphere 119.4
1873 Female, age 85, both hemispheres 110.9
2527 Male, age 74, both hemispheres 106.5
2045 Male, age 76, both hemispheres 96.6
2082 Female, age 91, right hemisphere 90.5
Hippocampus, CA2
nTPM: 105.9
1940 Female, age 85, left hemisphere 113.9
2249 Male, age 74, both hemispheres 110.1
2437 Female, age 94, left hemisphere 106.5
1892 Male, age 76, both hemispheres 105.1
2113 Female, age 91, right hemisphere 101.1
1963 Male, age 80, left hemisphere 98.8
Hippocampus, CA3
nTPM: 104.0
1891 Female, age 85, both hemispheres 110.5
2137 Male, age 80, left hemisphere 109.2
1867 Male, age 76, both hemispheres 108.8
2620 Female, age 94, left hemisphere 104.0
2436 Male, age 74, both hemispheres 102.2
2861 Female, age 67, both hemispheres 89.2
Parahippocampal cortex
nTPM: 105.5
2250 Female, age 67, right hemisphere 113.6
2532 Female, age 72, left hemisphere 112.7
2245 Female, age 91, both hemispheres 109.1
2692 Male, age 74, both hemispheres 108.1
1933 Female, age 85, both hemispheres 106.8
1850 Male, age 80, both hemispheres 106.4
2018 Male, age 76, both hemispheres 105.6
1990 Female, age 91, right hemisphere 101.0
2622 Female, age 67, right hemisphere 100.7
2693 Female, age 94, both hemispheres 91.3
Perirhinal gyrus
nTPM: 105.2
1794 Male, age 80, right hemisphere 112.1
1841 Female, age 85, right hemisphere 111.5
1847 Female, age 91, left hemisphere 108.8
2848 Male, age 76, right hemisphere 98.5
2521 Female, age 94, right hemisphere 94.8
Subiculum
nTPM: 114.2
2438 Female, age 94, left hemisphere 124.6
2619 Male, age 74, both hemispheres 116.3
2042 Male, age 76, both hemispheres 116.0
1901 Male, age 80, both hemispheres 111.7
2729 Female, age 91, right hemisphere 108.7
1977 Female, age 85, both hemispheres 107.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 86.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.4
Samples: 197

Max nTPM: 131.9
Min nTPM: 53.0
Std nTPM: 14.2
Median nTPM: 86.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 131.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 130.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 128.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 124.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 122.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 121.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 118.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 115.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 115.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 115.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 110.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.1
FF:10153-102I9 76 years, female 123.6
FF:10169-103B7 60 years, female 74.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 143.7
Pig sample Sample description nTPM
Subiculum
nTPM: 136.6
Samples: 4

Max nTPM: 163.2
Min nTPM: 126.6
Sample A Female 163.2
Sample B Female 126.6
Sample C Male 129.1
Sample D Male 127.6
Dorsal hippocampus
nTPM: 141.9
Samples: 4

Max nTPM: 174.9
Min nTPM: 109.4
Sample A Female 174.9
Sample B Female 131.6
Sample C Male 151.6
Sample D Male 109.4
Entorhinal cortex
nTPM: 134.4
Samples: 4

Max nTPM: 146.2
Min nTPM: 106.0
Sample A Female 146.2
Sample B Female 143.6
Sample C Male 141.7
Sample D Male 106.0
Ventral hippocampus
nTPM: 143.7
Samples: 4

Max nTPM: 183.7
Min nTPM: 106.0
Sample A Female 144.2
Sample B Female 106.0
Sample C Male 183.7
Sample D Male 141.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 130.9
Samples: 4

Max nTPM: 133.7
Min nTPM: 126.0
Sample A Male 126.0
Sample B Male 133.7
Sample C Female 132.5
Sample D Female 131.2
Hippocampal formation
nTPM: 132.1
Samples: 4

Max nTPM: 138.9
Min nTPM: 125.8
Sample A Male 138.9
Sample B Male 125.8
Sample C Female 133.1
Sample D Female 130.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71486970 Antisense, RP_050913_01_A08, Mouse strain C57BL/6J (56 days, male) 0.3

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