HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:129.8 nTPM
HPA Brain:92.4 nTPM
GTEx:129.8 nTPM
FANTOM5:237.8 Scaled Tags Per Million
Pig:29.8 nTPM
Mouse:43.2 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018475Antibody HPA018484Antibody HPA020017
Glial cells HighHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.4
Sample id Sample description nTPM
Hippocampus
nTPM: 85.1
2529 Female, age 94, left hemisphere 97.1
1911 Female, age 85, right hemisphere 95.1
2148 Female, age 91, left hemisphere 92.3
2621 Female, age 67, right hemisphere 77.9
1855 Male, age 76, left hemisphere 77.3
1898 Male, age 80, left hemisphere 70.7
Dentate gyrus
nTPM: 88.1
2531 Female, age 67, both hemispheres 103.5
2246 Female, age 85, both hemispheres 94.1
2530 Female, age 94, left hemisphere 88.7
2528 Male, age 74, both hemispheres 82.2
2010 Male, age 76, both hemispheres 80.9
1927 Female, age 91, both hemispheres 79.1
Entorhinal gyrus
nTPM: 88.6
2686 Male, age 75, right hemisphere 104.5
2117 Female, age 91, right hemisphere 93.5
1938 Female, age 85, left hemisphere 89.5
1787 Male, age 76, left hemisphere 83.7
2613 Female, age 94, left hemisphere 81.2
2764 Male, age 80, right hemisphere 79.0
Hippocampus, CA1
nTPM: 88.6
2045 Male, age 76, both hemispheres 96.3
1873 Female, age 85, both hemispheres 92.1
2082 Female, age 91, right hemisphere 88.7
2527 Male, age 74, both hemispheres 86.9
2749 Male, age 80, left hemisphere 78.8
Hippocampus, CA2
nTPM: 86.3
1940 Female, age 85, left hemisphere 95.5
2113 Female, age 91, right hemisphere 93.2
2437 Female, age 94, left hemisphere 87.0
1892 Male, age 76, both hemispheres 85.3
2249 Male, age 74, both hemispheres 78.5
1963 Male, age 80, left hemisphere 78.2
Hippocampus, CA3
nTPM: 86.2
1891 Female, age 85, both hemispheres 98.4
2137 Male, age 80, left hemisphere 89.1
2861 Female, age 67, both hemispheres 85.9
1867 Male, age 76, both hemispheres 85.4
2436 Male, age 74, both hemispheres 81.5
2620 Female, age 94, left hemisphere 76.9
Parahippocampal cortex
nTPM: 92.4
2018 Male, age 76, both hemispheres 100.3
1933 Female, age 85, both hemispheres 97.9
2245 Female, age 91, both hemispheres 96.9
2532 Female, age 72, left hemisphere 96.4
2250 Female, age 67, right hemisphere 96.3
2693 Female, age 94, both hemispheres 95.8
2692 Male, age 74, both hemispheres 92.8
1850 Male, age 80, both hemispheres 88.8
2622 Female, age 67, right hemisphere 79.9
1990 Female, age 91, right hemisphere 78.5
Perirhinal gyrus
nTPM: 81.8
1841 Female, age 85, right hemisphere 93.5
2848 Male, age 76, right hemisphere 87.1
2521 Female, age 94, right hemisphere 84.7
1794 Male, age 80, right hemisphere 76.7
1847 Female, age 91, left hemisphere 66.9
Subiculum
nTPM: 89.4
2042 Male, age 76, both hemispheres 98.8
1901 Male, age 80, both hemispheres 93.6
2438 Female, age 94, left hemisphere 90.4
1977 Female, age 85, both hemispheres 89.7
2729 Female, age 91, right hemisphere 85.1
2619 Male, age 74, both hemispheres 78.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 129.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 129.8
Samples: 197

Max nTPM: 274.7
Min nTPM: 66.8
Std nTPM: 35.8
Median nTPM: 122.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 274.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 258.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 247.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 229.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 225.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 216.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 212.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 211.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 210.1
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 205.3
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 200.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 237.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 237.8
FF:10153-102I9 76 years, female 239.9
FF:10169-103B7 60 years, female 235.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.8
Pig sample Sample description nTPM
Subiculum
nTPM: 29.8
Samples: 4

Max nTPM: 31.8
Min nTPM: 26.5
Sample A Female 26.5
Sample B Female 31.6
Sample C Male 29.4
Sample D Male 31.8
Dorsal hippocampus
nTPM: 26.4
Samples: 4

Max nTPM: 32.0
Min nTPM: 19.3
Sample A Female 19.3
Sample B Female 25.0
Sample C Male 29.3
Sample D Male 32.0
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 36.5
Min nTPM: 25.9
Sample A Female 26.2
Sample B Female 28.9
Sample C Male 25.9
Sample D Male 36.5
Ventral hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 31.7
Min nTPM: 18.8
Sample A Female 26.0
Sample B Female 31.7
Sample C Male 18.8
Sample D Male 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.0
Samples: 4

Max nTPM: 48.6
Min nTPM: 32.7
Sample A Male 40.5
Sample B Male 48.6
Sample C Female 42.1
Sample D Female 32.7
Hippocampal formation
nTPM: 43.2
Samples: 4

Max nTPM: 50.0
Min nTPM: 32.6
Sample A Male 50.0
Sample B Male 47.8
Sample C Female 32.6
Sample D Female 42.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
69407511 Antisense, RP_050414_01_G09, Mouse strain C57BL/6J (56 days, male) 7.6

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