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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
170.4
nTPM
GTEx:
170.4
nTPM
FANTOM5:
86.1
Scaled Tags Per Million
Pig:
38.9
nTPM
Mouse:
61.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
170.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 170.4
Samples: 105
Max nTPM: 285.7
Min nTPM: 110.3
Std nTPM: 39.3
Median nTPM: 0.0
413_1
59 years, female
285.7
501_1
88 years, male
263.5
142_1
61 years, female
262.3
162_1
79 years, female
259.2
139_1
64 years, female
258.6
137_1
83 years, male
250.0
217_1
76 years, male
242.2
89_1
63 years, male
240.6
43_1
64 years, female
238.2
415_1
77 years, female
233.3
17_1
71 years, male
227.6
491_1
89 years, female
226.0
414_1
84 years, female
224.5
145_1
84 years, male
224.2
149_1
88 years, male
218.0
32_1
67 years, male
213.4
315_1
62 years, female
212.7
490_1
67 years, female
211.8
314_1
67 years, male
211.7
4_1
88 years, female
210.9
119_1
70 years, female
206.2
396_1
62 years, male
201.9
265_1
87 years, male
195.7
117_1
61 years, male
194.8
322_1
76 years, male
192.7
120_1
70 years, female
191.4
313_1
79 years, female
187.5
288_1
66 years, female
187.4
35_1
74 years, female
185.7
81_1
67 years, male
185.5
379_1
60 years, male
184.9
266_1
85 years, male
183.4
153_1
70 years, female
182.4
404_1
82 years, female
182.0
6_1
73 years, female
181.7
126_1
63 years, male
181.5
311_1
78 years, male
179.5
348_1
84 years, male
178.9
264_1
73 years, female
178.3
316_1
62 years, male
178.1
324_1
76 years, male
177.7
308_1
70 years, female
176.9
466_1
57 years, female
172.7
2_1
77 years, female
172.0
468_1
89 years, male
171.4
499_1
55 years, female
170.6
286_1
68 years, female
169.3
229_1
69 years, female
168.0
18_1
88 years, male
167.7
109_1
81 years, female
166.3
307_1
66 years, female
166.1
254_1
77 years, female
165.6
452_1
88 years, female
161.3
389_1
86 years, female
159.5
41_1
94 years, female
159.3
447_1
81 years, male
159.1
495_1
57 years, female
158.8
115_1
83 years, male
158.7
189_1
76 years, male
157.4
375_1
74 years, female
157.2
503_1
68 years, male
156.9
295_1
61 years, female
156.4
335_1
73 years, female
155.0
42_1
85 years, male
154.3
354_1
81 years, female
152.1
506_1
65 years, male
151.5
321_1
62 years, female
151.2
9_1
66 years, female
149.4
291_1
76 years, male
148.7
518_1
75 years, female
148.6
386_1
76 years, male
146.3
517_1
88 years, male
146.2
405_1
91 years, male
145.3
237_1
82 years, male
145.2
246_1
77 years, male
145.1
218_1
71 years, female
144.8
349_1
83 years, male
143.8
406_1
79 years, male
143.1
353_1
82 years, female
139.8
394_1
75 years, female
138.1
356_1
87 years, female
137.5
384_1
83 years, male
137.4
376_1
75 years, female
137.2
320_1
89 years, female
136.0
292_1
71 years, male
135.9
350_1
84 years, female
133.7
173_1
67 years, male
133.0
318_1
68 years, male
132.0
319_1
81 years, male
131.8
243_1
75 years, male
131.3
351_1
91 years, male
131.1
177_1
74 years, male
129.9
352_1
62 years, male
129.2
317_1
60 years, male
127.6
251_1
78 years, male
124.5
99_1
64 years, male
123.5
526_1
61 years, male
122.0
293_1
68 years, female
120.0
163_1
78 years, male
119.9
172_1
72 years, female
119.3
377_1
82 years, female
117.9
480_1
63 years, male
115.6
355_1
70 years, female
113.4
425_1
59 years, female
112.5
347_1
72 years, male
110.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.