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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.7
nTPM
Monaco:
103.2
nTPM
Schmiedel:
107.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.7
HPA sample
nTPM
gdT-cell nTPM: 37.3
Samples: 6
Max nTPM: 55.4
Min nTPM: 28.6
P10809_1007
28.6
P10809_1022
55.4
P10809_1041
41.8
P10809_1060
36.4
P10809_1077
31.0
P10809_1098
30.3
MAIT T-cell nTPM: 41.7
Samples: 6
Max nTPM: 62.3
Min nTPM: 26.5
P10809_1006
36.3
P10809_1024
62.3
P10809_1043
50.2
P10809_1062
34.9
P10809_1083
26.5
P10809_1097
40.2
Memory CD4 T-cell nTPM: 33.0
Samples: 6
Max nTPM: 42.0
Min nTPM: 26.8
P10809_1014
31.3
P10809_1026
36.9
P10809_1045
42.0
P10809_1064
31.3
P10809_1086
26.8
P10809_1113
29.6
Memory CD8 T-cell nTPM: 36.0
Samples: 5
Max nTPM: 42.6
Min nTPM: 28.3
P10809_1012
36.3
P10809_1027
42.6
P10809_1046
41.4
P10809_1065
31.6
P10809_1111
28.3
Naive CD4 T-cell nTPM: 28.9
Samples: 6
Max nTPM: 35.1
Min nTPM: 20.7
P10809_1015
24.5
P10809_1030
35.1
P10809_1049
32.2
P10809_1068
30.6
P10809_1085
20.7
P10809_1112
30.2
Naive CD8 T-cell nTPM: 32.3
Samples: 6
Max nTPM: 40.4
Min nTPM: 24.4
P10809_1016
29.5
P10809_1031
40.4
P10809_1050
38.0
P10809_1069
33.5
P10809_1087
24.4
P10809_1110
28.1
T-reg nTPM: 35.3
Samples: 6
Max nTPM: 43.9
Min nTPM: 21.2
P10809_1018
43.9
P10809_1037
34.2
P10809_1056
37.1
P10809_1075
34.0
P10809_1094
41.5
P10809_1106
21.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.2
Samples: 4
Max nTPM: 98.2
Min nTPM: 57.3
RHH5202_R3573
78.6
RHH5230_R3602
57.3
RHH5259_R3631
98.2
RHH5288_R3660
66.6
Effector memory CD8 T-cell nTPM: 103.2
Samples: 4
Max nTPM: 120.0
Min nTPM: 89.6
RHH5203_R3574
89.6
RHH5231_R3603
106.8
RHH5260_R3632
120.0
RHH5289_R3661
96.4
MAIT T-cell nTPM: 85.7
Samples: 4
Max nTPM: 111.9
Min nTPM: 70.3
RHH5233_R3605
76.7
RHH5205_R3576
111.9
RHH5262_R3634
83.8
RHH5297_R3663
70.3
Memory CD4 T-cell TFH nTPM: 94.1
Samples: 4
Max nTPM: 120.6
Min nTPM: 70.8
RHH5300_R3666
70.8
RHH5236_R3608
85.4
RHH5265_R3637
99.4
RHH5208_R3579
120.6
Memory CD4 T-cell Th1 nTPM: 88.8
Samples: 4
Max nTPM: 100.0
Min nTPM: 68.6
RHH5210_R3581
94.7
RHH5302_R3668
68.6
RHH5238_R3610
100.0
RHH5267_R3639
91.7
Memory CD4 T-cell Th1/Th17 nTPM: 82.9
Samples: 4
Max nTPM: 87.5
Min nTPM: 78.8
RHH5303_R3669
83.9
RHH5211_R3582
81.5
RHH5239_R3611
78.8
RHH5268_R3640
87.5
Memory CD4 T-cell Th17 nTPM: 89.5
Samples: 4
Max nTPM: 109.9
Min nTPM: 80.1
RHH5304_R3670
80.1
RHH5212_R3583
83.8
RHH5240_R3612
109.9
RHH5269_R3641
84.3
Memory CD4 T-cell Th2 nTPM: 78.5
Samples: 4
Max nTPM: 104.0
Min nTPM: 47.9
RHH5305_R3671
76.0
RHH5213_R3584
86.0
RHH5241_R3613
47.9
RHH5270_R3642
104.0
Naive CD4 T-cell nTPM: 83.4
Samples: 4
Max nTPM: 96.2
Min nTPM: 62.2
RHH5306_R3672
96.2
RHH5214_R3585
88.9
RHH5242_R3614
62.2
RHH5271_R3643
86.1
Naive CD8 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 86.3
Min nTPM: 66.1
RHH5201_R3572
71.9
RHH5229_R3601
86.3
RHH5258_R3630
66.1
RHH5287_R3659
81.4
Non-Vd2 gdTCR nTPM: 101.6
Samples: 4
Max nTPM: 126.8
Min nTPM: 72.5
RHH5235_R3607
72.5
RHH5264_R3636
126.8
RHH5207_R3578
113.3
RHH5299_R3665
93.7
T-reg nTPM: 74.1
Samples: 4
Max nTPM: 84.3
Min nTPM: 66.0
RHH5301_R3667
77.4
RHH5237_R3609
68.6
RHH5266_R3638
66.0
RHH5209_R3580
84.3
Terminal effector memory CD4 T-cell nTPM: 91.8
Samples: 2
Max nTPM: 94.2
Min nTPM: 89.3
RHH5243_R3615
94.2
RHH5272_R3644
89.3
Terminal effector memory CD8 T-cell nTPM: 102.4
Samples: 4
Max nTPM: 120.1
Min nTPM: 77.6
RHH5232_R3604
118.1
RHH5204_R3575
77.6
RHH5261_R3633
120.1
RHH5296_R3662
93.7
Vd2 gdTCR nTPM: 83.0
Samples: 4
Max nTPM: 122.3
Min nTPM: 57.7
RHH5234_R3606
58.0
RHH5206_R3577
93.8
RHH5263_R3635
122.3
RHH5298_R3664
57.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
