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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.7
nTPM
Monaco:
217.6
nTPM
Schmiedel:
178.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.7
HPA sample
nTPM
gdT-cell nTPM: 52.7
Samples: 6
Max nTPM: 71.6
Min nTPM: 39.7
P10809_1007
39.7
P10809_1022
71.6
P10809_1041
60.1
P10809_1060
50.8
P10809_1077
44.8
P10809_1098
49.4
MAIT T-cell nTPM: 49.4
Samples: 6
Max nTPM: 85.8
Min nTPM: 28.1
P10809_1006
46.3
P10809_1024
85.8
P10809_1043
47.3
P10809_1062
41.7
P10809_1083
28.1
P10809_1097
47.2
Memory CD4 T-cell nTPM: 37.6
Samples: 6
Max nTPM: 45.8
Min nTPM: 30.3
P10809_1014
30.6
P10809_1026
35.4
P10809_1045
45.8
P10809_1064
30.3
P10809_1086
43.5
P10809_1113
40.1
Memory CD8 T-cell nTPM: 43.5
Samples: 5
Max nTPM: 48.5
Min nTPM: 39.1
P10809_1012
39.1
P10809_1027
46.2
P10809_1046
48.5
P10809_1065
44.3
P10809_1111
39.4
Naive CD4 T-cell nTPM: 34.5
Samples: 6
Max nTPM: 42.3
Min nTPM: 26.7
P10809_1015
35.7
P10809_1030
32.1
P10809_1049
26.7
P10809_1068
34.0
P10809_1085
42.3
P10809_1112
35.9
Naive CD8 T-cell nTPM: 39.5
Samples: 6
Max nTPM: 51.0
Min nTPM: 29.3
P10809_1016
29.3
P10809_1031
51.0
P10809_1050
36.8
P10809_1069
37.5
P10809_1087
46.0
P10809_1110
36.6
T-reg nTPM: 47.7
Samples: 6
Max nTPM: 65.3
Min nTPM: 35.6
P10809_1018
35.6
P10809_1037
65.3
P10809_1056
35.9
P10809_1075
44.6
P10809_1094
42.8
P10809_1106
61.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
217.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 158.4
Samples: 4
Max nTPM: 209.5
Min nTPM: 130.0
RHH5202_R3573
147.5
RHH5230_R3602
146.6
RHH5259_R3631
209.5
RHH5288_R3660
130.0
Effector memory CD8 T-cell nTPM: 200.2
Samples: 4
Max nTPM: 216.7
Min nTPM: 169.8
RHH5203_R3574
169.8
RHH5231_R3603
207.3
RHH5260_R3632
216.7
RHH5289_R3661
206.9
MAIT T-cell nTPM: 171.5
Samples: 4
Max nTPM: 234.1
Min nTPM: 107.9
RHH5233_R3605
181.9
RHH5205_R3576
234.1
RHH5262_R3634
162.1
RHH5297_R3663
107.9
Memory CD4 T-cell TFH nTPM: 127.6
Samples: 4
Max nTPM: 138.2
Min nTPM: 106.3
RHH5300_R3666
106.3
RHH5236_R3608
136.6
RHH5265_R3637
129.4
RHH5208_R3579
138.2
Memory CD4 T-cell Th1 nTPM: 137.5
Samples: 4
Max nTPM: 181.9
Min nTPM: 112.9
RHH5210_R3581
117.5
RHH5302_R3668
112.9
RHH5238_R3610
181.9
RHH5267_R3639
137.5
Memory CD4 T-cell Th1/Th17 nTPM: 172.9
Samples: 4
Max nTPM: 240.3
Min nTPM: 120.7
RHH5303_R3669
120.7
RHH5211_R3582
171.7
RHH5239_R3611
240.3
RHH5268_R3640
159.0
Memory CD4 T-cell Th17 nTPM: 162.6
Samples: 4
Max nTPM: 198.5
Min nTPM: 131.3
RHH5304_R3670
131.3
RHH5212_R3583
156.2
RHH5240_R3612
164.5
RHH5269_R3641
198.5
Memory CD4 T-cell Th2 nTPM: 143.6
Samples: 4
Max nTPM: 162.3
Min nTPM: 106.3
RHH5305_R3671
106.3
RHH5213_R3584
162.3
RHH5241_R3613
153.6
RHH5270_R3642
152.0
Naive CD4 T-cell nTPM: 127.2
Samples: 4
Max nTPM: 145.9
Min nTPM: 107.5
RHH5306_R3672
107.5
RHH5214_R3585
114.1
RHH5242_R3614
145.9
RHH5271_R3643
141.3
Naive CD8 T-cell nTPM: 142.5
Samples: 4
Max nTPM: 167.7
Min nTPM: 118.4
RHH5201_R3572
137.7
RHH5229_R3601
167.7
RHH5258_R3630
146.2
RHH5287_R3659
118.4
Non-Vd2 gdTCR nTPM: 205.4
Samples: 4
Max nTPM: 278.5
Min nTPM: 153.6
RHH5235_R3607
278.5
RHH5264_R3636
157.5
RHH5207_R3578
231.8
RHH5299_R3665
153.6
T-reg nTPM: 129.0
Samples: 4
Max nTPM: 158.7
Min nTPM: 99.5
RHH5301_R3667
99.5
RHH5237_R3609
158.7
RHH5266_R3638
114.2
RHH5209_R3580
143.5
Terminal effector memory CD4 T-cell nTPM: 217.6
Samples: 2
Max nTPM: 268.6
Min nTPM: 166.6
RHH5243_R3615
268.6
RHH5272_R3644
166.6
Terminal effector memory CD8 T-cell nTPM: 210.0
Samples: 4
Max nTPM: 271.2
Min nTPM: 152.6
RHH5232_R3604
271.2
RHH5204_R3575
172.4
RHH5261_R3633
243.7
RHH5296_R3662
152.6
Vd2 gdTCR nTPM: 197.5
Samples: 4
Max nTPM: 231.0
Min nTPM: 118.5
RHH5234_R3606
220.3
RHH5206_R3577
231.0
RHH5263_R3635
220.2
RHH5298_R3664
118.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
