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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.3
nTPM
Monaco:
217.0
nTPM
Schmiedel:
174.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.3
HPA sample
nTPM
gdT-cell nTPM: 21.6
Samples: 6
Max nTPM: 26.0
Min nTPM: 14.4
P10809_1007
22.0
P10809_1022
19.7
P10809_1041
14.4
P10809_1060
24.9
P10809_1077
26.0
P10809_1098
22.6
MAIT T-cell nTPM: 26.1
Samples: 6
Max nTPM: 30.7
Min nTPM: 17.2
P10809_1006
29.7
P10809_1024
27.8
P10809_1043
24.9
P10809_1062
17.2
P10809_1083
26.3
P10809_1097
30.7
Memory CD4 T-cell nTPM: 18.1
Samples: 6
Max nTPM: 21.6
Min nTPM: 15.7
P10809_1014
21.6
P10809_1026
18.1
P10809_1045
18.2
P10809_1064
17.3
P10809_1086
17.9
P10809_1113
15.7
Memory CD8 T-cell nTPM: 24.2
Samples: 5
Max nTPM: 27.0
Min nTPM: 19.8
P10809_1012
24.2
P10809_1027
27.0
P10809_1046
23.2
P10809_1065
26.7
P10809_1111
19.8
Naive CD4 T-cell nTPM: 17.0
Samples: 6
Max nTPM: 19.2
Min nTPM: 13.4
P10809_1015
17.2
P10809_1030
19.2
P10809_1049
15.7
P10809_1068
17.6
P10809_1085
19.1
P10809_1112
13.4
Naive CD8 T-cell nTPM: 19.8
Samples: 6
Max nTPM: 27.7
Min nTPM: 16.2
P10809_1016
17.4
P10809_1031
21.4
P10809_1050
16.2
P10809_1069
27.7
P10809_1087
19.4
P10809_1110
16.5
T-reg nTPM: 30.3
Samples: 6
Max nTPM: 42.8
Min nTPM: 3.9
P10809_1018
38.6
P10809_1037
42.8
P10809_1056
3.9
P10809_1075
29.1
P10809_1094
31.6
P10809_1106
35.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
217.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 162.4
Samples: 4
Max nTPM: 185.1
Min nTPM: 134.6
RHH5202_R3573
185.1
RHH5230_R3602
177.8
RHH5259_R3631
152.1
RHH5288_R3660
134.6
Effector memory CD8 T-cell nTPM: 160.6
Samples: 4
Max nTPM: 244.5
Min nTPM: 121.5
RHH5203_R3574
145.3
RHH5231_R3603
131.0
RHH5260_R3632
121.5
RHH5289_R3661
244.5
MAIT T-cell nTPM: 166.8
Samples: 4
Max nTPM: 207.5
Min nTPM: 116.0
RHH5233_R3605
155.4
RHH5205_R3576
207.5
RHH5262_R3634
116.0
RHH5297_R3663
188.2
Memory CD4 T-cell TFH nTPM: 136.8
Samples: 4
Max nTPM: 158.4
Min nTPM: 116.7
RHH5300_R3666
152.7
RHH5236_R3608
116.7
RHH5265_R3637
158.4
RHH5208_R3579
119.5
Memory CD4 T-cell Th1 nTPM: 141.0
Samples: 4
Max nTPM: 144.6
Min nTPM: 138.4
RHH5210_R3581
138.4
RHH5302_R3668
144.6
RHH5238_R3610
141.5
RHH5267_R3639
139.5
Memory CD4 T-cell Th1/Th17 nTPM: 150.4
Samples: 4
Max nTPM: 182.5
Min nTPM: 112.7
RHH5303_R3669
182.5
RHH5211_R3582
112.7
RHH5239_R3611
149.1
RHH5268_R3640
157.2
Memory CD4 T-cell Th17 nTPM: 145.8
Samples: 4
Max nTPM: 182.6
Min nTPM: 116.9
RHH5304_R3670
182.6
RHH5212_R3583
116.9
RHH5240_R3612
154.7
RHH5269_R3641
129.1
Memory CD4 T-cell Th2 nTPM: 159.0
Samples: 4
Max nTPM: 176.4
Min nTPM: 127.5
RHH5305_R3671
167.8
RHH5213_R3584
127.5
RHH5241_R3613
164.3
RHH5270_R3642
176.4
Naive CD4 T-cell nTPM: 143.2
Samples: 4
Max nTPM: 162.7
Min nTPM: 128.0
RHH5306_R3672
151.0
RHH5214_R3585
128.0
RHH5242_R3614
162.7
RHH5271_R3643
131.1
Naive CD8 T-cell nTPM: 128.7
Samples: 4
Max nTPM: 136.9
Min nTPM: 112.9
RHH5201_R3572
136.5
RHH5229_R3601
112.9
RHH5258_R3630
136.9
RHH5287_R3659
128.5
Non-Vd2 gdTCR nTPM: 191.3
Samples: 4
Max nTPM: 218.1
Min nTPM: 136.1
RHH5235_R3607
204.3
RHH5264_R3636
136.1
RHH5207_R3578
206.8
RHH5299_R3665
218.1
T-reg nTPM: 152.9
Samples: 4
Max nTPM: 164.2
Min nTPM: 140.6
RHH5301_R3667
157.6
RHH5237_R3609
149.1
RHH5266_R3638
164.2
RHH5209_R3580
140.6
Terminal effector memory CD4 T-cell nTPM: 217.0
Samples: 2
Max nTPM: 256.6
Min nTPM: 177.4
RHH5243_R3615
256.6
RHH5272_R3644
177.4
Terminal effector memory CD8 T-cell nTPM: 186.4
Samples: 4
Max nTPM: 230.2
Min nTPM: 134.0
RHH5232_R3604
230.2
RHH5204_R3575
160.8
RHH5261_R3633
134.0
RHH5296_R3662
220.7
Vd2 gdTCR nTPM: 144.9
Samples: 4
Max nTPM: 181.7
Min nTPM: 121.3
RHH5234_R3606
181.7
RHH5206_R3577
121.3
RHH5263_R3635
140.4
RHH5298_R3664
136.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
