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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
422.4
nTPM
Monaco:
1057.7
nTPM
Schmiedel:
384.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
422.4
HPA sample
nTPM
gdT-cell nTPM: 422.4
Samples: 6
Max nTPM: 496.1
Min nTPM: 360.1
P10809_1007
410.4
P10809_1022
496.1
P10809_1041
384.5
P10809_1060
360.1
P10809_1077
437.7
P10809_1098
445.8
MAIT T-cell nTPM: 280.3
Samples: 6
Max nTPM: 323.1
Min nTPM: 226.0
P10809_1006
292.8
P10809_1024
247.0
P10809_1043
226.0
P10809_1062
294.7
P10809_1083
298.2
P10809_1097
323.1
Memory CD4 T-cell nTPM: 256.3
Samples: 6
Max nTPM: 317.3
Min nTPM: 211.4
P10809_1014
256.2
P10809_1026
236.4
P10809_1045
232.7
P10809_1064
283.9
P10809_1086
317.3
P10809_1113
211.4
Memory CD8 T-cell nTPM: 360.3
Samples: 5
Max nTPM: 398.5
Min nTPM: 315.4
P10809_1012
352.7
P10809_1027
344.0
P10809_1046
391.1
P10809_1065
398.5
P10809_1111
315.4
Naive CD4 T-cell nTPM: 148.0
Samples: 6
Max nTPM: 194.0
Min nTPM: 121.7
P10809_1015
167.6
P10809_1030
124.4
P10809_1049
121.7
P10809_1068
138.2
P10809_1085
194.0
P10809_1112
141.8
Naive CD8 T-cell nTPM: 266.9
Samples: 6
Max nTPM: 353.6
Min nTPM: 183.2
P10809_1016
183.2
P10809_1031
272.0
P10809_1050
255.8
P10809_1069
328.6
P10809_1087
353.6
P10809_1110
208.2
T-reg nTPM: 309.9
Samples: 6
Max nTPM: 366.5
Min nTPM: 285.4
P10809_1018
366.5
P10809_1037
285.8
P10809_1056
326.2
P10809_1075
299.1
P10809_1094
285.4
P10809_1106
296.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1057.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 419.3
Samples: 4
Max nTPM: 508.5
Min nTPM: 255.5
RHH5202_R3573
255.5
RHH5230_R3602
508.0
RHH5259_R3631
405.3
RHH5288_R3660
508.5
Effector memory CD8 T-cell nTPM: 864.3
Samples: 4
Max nTPM: 992.5
Min nTPM: 536.4
RHH5203_R3574
965.8
RHH5231_R3603
992.5
RHH5260_R3632
962.6
RHH5289_R3661
536.4
MAIT T-cell nTPM: 583.0
Samples: 4
Max nTPM: 617.0
Min nTPM: 541.8
RHH5233_R3605
541.8
RHH5205_R3576
610.8
RHH5262_R3634
617.0
RHH5297_R3663
562.4
Memory CD4 T-cell TFH nTPM: 399.7
Samples: 4
Max nTPM: 516.6
Min nTPM: 162.6
RHH5300_R3666
458.8
RHH5236_R3608
460.8
RHH5265_R3637
516.6
RHH5208_R3579
162.6
Memory CD4 T-cell Th1 nTPM: 463.6
Samples: 4
Max nTPM: 518.8
Min nTPM: 394.0
RHH5210_R3581
394.0
RHH5302_R3668
492.5
RHH5238_R3610
449.0
RHH5267_R3639
518.8
Memory CD4 T-cell Th1/Th17 nTPM: 388.4
Samples: 4
Max nTPM: 522.2
Min nTPM: 231.5
RHH5303_R3669
231.5
RHH5211_R3582
522.2
RHH5239_R3611
347.9
RHH5268_R3640
452.0
Memory CD4 T-cell Th17 nTPM: 520.4
Samples: 4
Max nTPM: 620.8
Min nTPM: 457.2
RHH5304_R3670
518.1
RHH5212_R3583
485.5
RHH5240_R3612
620.8
RHH5269_R3641
457.2
Memory CD4 T-cell Th2 nTPM: 478.9
Samples: 4
Max nTPM: 528.2
Min nTPM: 389.8
RHH5305_R3671
514.0
RHH5213_R3584
483.5
RHH5241_R3613
389.8
RHH5270_R3642
528.2
Naive CD4 T-cell nTPM: 314.0
Samples: 4
Max nTPM: 324.6
Min nTPM: 303.3
RHH5306_R3672
314.2
RHH5214_R3585
303.3
RHH5242_R3614
324.6
RHH5271_R3643
314.0
Naive CD8 T-cell nTPM: 210.4
Samples: 4
Max nTPM: 296.6
Min nTPM: 60.2
RHH5201_R3572
60.2
RHH5229_R3601
191.1
RHH5258_R3630
296.6
RHH5287_R3659
293.5
Non-Vd2 gdTCR nTPM: 1057.7
Samples: 4
Max nTPM: 1127.1
Min nTPM: 943.2
RHH5235_R3607
1098.8
RHH5264_R3636
1127.1
RHH5207_R3578
943.2
RHH5299_R3665
1061.7
T-reg nTPM: 420.0
Samples: 4
Max nTPM: 529.3
Min nTPM: 349.8
RHH5301_R3667
398.1
RHH5237_R3609
529.3
RHH5266_R3638
402.6
RHH5209_R3580
349.8
Terminal effector memory CD4 T-cell nTPM: 999.4
Samples: 2
Max nTPM: 1128.5
Min nTPM: 870.2
RHH5243_R3615
1128.5
RHH5272_R3644
870.2
Terminal effector memory CD8 T-cell nTPM: 977.8
Samples: 4
Max nTPM: 1169.1
Min nTPM: 666.8
RHH5232_R3604
1169.1
RHH5204_R3575
948.6
RHH5261_R3633
1126.5
RHH5296_R3662
666.8
Vd2 gdTCR nTPM: 743.1
Samples: 4
Max nTPM: 863.8
Min nTPM: 659.9
RHH5234_R3606
663.9
RHH5206_R3577
863.8
RHH5263_R3635
784.6
RHH5298_R3664
659.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.