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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
91.0
nTPM
Monaco:
226.0
nTPM
Schmiedel:
126.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.0
HPA sample
nTPM
gdT-cell nTPM: 62.8
Samples: 6
Max nTPM: 68.4
Min nTPM: 53.8
P10809_1007
63.9
P10809_1022
68.2
P10809_1041
53.8
P10809_1060
68.4
P10809_1077
60.8
P10809_1098
61.9
MAIT T-cell nTPM: 91.0
Samples: 6
Max nTPM: 118.0
Min nTPM: 58.6
P10809_1006
88.1
P10809_1024
95.9
P10809_1043
58.6
P10809_1062
83.3
P10809_1083
102.0
P10809_1097
118.0
Memory CD4 T-cell nTPM: 73.3
Samples: 6
Max nTPM: 79.2
Min nTPM: 69.0
P10809_1014
73.4
P10809_1026
69.0
P10809_1045
69.1
P10809_1064
76.8
P10809_1086
79.2
P10809_1113
72.5
Memory CD8 T-cell nTPM: 79.2
Samples: 5
Max nTPM: 88.8
Min nTPM: 70.5
P10809_1012
70.5
P10809_1027
82.5
P10809_1046
79.2
P10809_1065
74.9
P10809_1111
88.8
Naive CD4 T-cell nTPM: 90.5
Samples: 6
Max nTPM: 100.8
Min nTPM: 70.4
P10809_1015
91.1
P10809_1030
96.6
P10809_1049
70.4
P10809_1068
100.8
P10809_1085
91.8
P10809_1112
92.0
Naive CD8 T-cell nTPM: 80.8
Samples: 6
Max nTPM: 85.5
Min nTPM: 68.4
P10809_1016
85.2
P10809_1031
85.5
P10809_1050
68.4
P10809_1069
81.0
P10809_1087
84.4
P10809_1110
80.0
T-reg nTPM: 68.7
Samples: 6
Max nTPM: 79.5
Min nTPM: 45.1
P10809_1018
67.5
P10809_1037
78.8
P10809_1056
75.4
P10809_1075
45.1
P10809_1094
65.8
P10809_1106
79.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 182.2
Samples: 4
Max nTPM: 218.3
Min nTPM: 142.8
RHH5202_R3573
218.3
RHH5230_R3602
159.5
RHH5259_R3631
142.8
RHH5288_R3660
208.0
Effector memory CD8 T-cell nTPM: 199.0
Samples: 4
Max nTPM: 259.5
Min nTPM: 143.2
RHH5203_R3574
259.5
RHH5231_R3603
192.2
RHH5260_R3632
143.2
RHH5289_R3661
201.0
MAIT T-cell nTPM: 200.3
Samples: 4
Max nTPM: 234.6
Min nTPM: 146.6
RHH5233_R3605
208.1
RHH5205_R3576
146.6
RHH5262_R3634
234.6
RHH5297_R3663
211.9
Memory CD4 T-cell TFH nTPM: 191.2
Samples: 4
Max nTPM: 226.7
Min nTPM: 164.3
RHH5300_R3666
167.7
RHH5236_R3608
164.3
RHH5265_R3637
206.2
RHH5208_R3579
226.7
Memory CD4 T-cell Th1 nTPM: 196.9
Samples: 4
Max nTPM: 253.7
Min nTPM: 124.1
RHH5210_R3581
253.7
RHH5302_R3668
229.0
RHH5238_R3610
124.1
RHH5267_R3639
180.8
Memory CD4 T-cell Th1/Th17 nTPM: 198.0
Samples: 4
Max nTPM: 274.9
Min nTPM: 131.7
RHH5303_R3669
274.9
RHH5211_R3582
237.3
RHH5239_R3611
131.7
RHH5268_R3640
148.0
Memory CD4 T-cell Th17 nTPM: 167.5
Samples: 4
Max nTPM: 190.2
Min nTPM: 150.8
RHH5304_R3670
176.7
RHH5212_R3583
190.2
RHH5240_R3612
152.3
RHH5269_R3641
150.8
Memory CD4 T-cell Th2 nTPM: 221.1
Samples: 4
Max nTPM: 253.4
Min nTPM: 194.5
RHH5305_R3671
219.0
RHH5213_R3584
217.6
RHH5241_R3613
253.4
RHH5270_R3642
194.5
Naive CD4 T-cell nTPM: 226.0
Samples: 4
Max nTPM: 258.5
Min nTPM: 209.8
RHH5306_R3672
215.6
RHH5214_R3585
258.5
RHH5242_R3614
220.2
RHH5271_R3643
209.8
Naive CD8 T-cell nTPM: 205.0
Samples: 4
Max nTPM: 258.6
Min nTPM: 106.4
RHH5201_R3572
258.6
RHH5229_R3601
106.4
RHH5258_R3630
258.0
RHH5287_R3659
197.0
Non-Vd2 gdTCR nTPM: 197.1
Samples: 4
Max nTPM: 227.5
Min nTPM: 139.2
RHH5235_R3607
139.2
RHH5264_R3636
203.3
RHH5207_R3578
227.5
RHH5299_R3665
218.4
T-reg nTPM: 186.6
Samples: 4
Max nTPM: 218.4
Min nTPM: 145.4
RHH5301_R3667
218.4
RHH5237_R3609
145.4
RHH5266_R3638
183.8
RHH5209_R3580
198.9
Terminal effector memory CD4 T-cell nTPM: 189.9
Samples: 2
Max nTPM: 231.5
Min nTPM: 148.3
RHH5243_R3615
148.3
RHH5272_R3644
231.5
Terminal effector memory CD8 T-cell nTPM: 200.5
Samples: 4
Max nTPM: 251.6
Min nTPM: 145.4
RHH5232_R3604
202.9
RHH5204_R3575
202.1
RHH5261_R3633
145.4
RHH5296_R3662
251.6
Vd2 gdTCR nTPM: 206.7
Samples: 4
Max nTPM: 247.0
Min nTPM: 142.1
RHH5234_R3606
242.9
RHH5206_R3577
247.0
RHH5263_R3635
142.1
RHH5298_R3664
194.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
