HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.8 nTPM
HPA Brain:17.1 nTPM
GTEx:20.8 nTPM
FANTOM5:70.3 Scaled Tags Per Million
Pig:34.8 nTPM
Mouse:52.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026858
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.7
1898 Male, age 80, left hemisphere 21.7
1855 Male, age 76, left hemisphere 18.7
2148 Female, age 91, left hemisphere 14.4
1911 Female, age 85, right hemisphere 13.7
2529 Female, age 94, left hemisphere 12.8
2621 Female, age 67, right hemisphere 12.6
Dentate gyrus
nTPM: 15.6
1927 Female, age 91, both hemispheres 19.9
2010 Male, age 76, both hemispheres 17.1
2246 Female, age 85, both hemispheres 15.2
2528 Male, age 74, both hemispheres 15.0
2530 Female, age 94, left hemisphere 14.4
2531 Female, age 67, both hemispheres 12.3
Entorhinal gyrus
nTPM: 13.9
1938 Female, age 85, left hemisphere 18.0
1787 Male, age 76, left hemisphere 13.8
2764 Male, age 80, right hemisphere 13.6
2686 Male, age 75, right hemisphere 13.1
2613 Female, age 94, left hemisphere 12.9
2117 Female, age 91, right hemisphere 12.4
Hippocampus, CA1
nTPM: 17.1
2749 Male, age 80, left hemisphere 23.9
1873 Female, age 85, both hemispheres 20.0
2045 Male, age 76, both hemispheres 14.9
2527 Male, age 74, both hemispheres 14.2
2082 Female, age 91, right hemisphere 12.6
Hippocampus, CA2
nTPM: 15.5
1892 Male, age 76, both hemispheres 20.5
1963 Male, age 80, left hemisphere 19.8
2437 Female, age 94, left hemisphere 15.0
2249 Male, age 74, both hemispheres 13.5
1940 Female, age 85, left hemisphere 12.1
2113 Female, age 91, right hemisphere 11.9
Hippocampus, CA3
nTPM: 15.3
1867 Male, age 76, both hemispheres 19.3
2137 Male, age 80, left hemisphere 19.2
1891 Female, age 85, both hemispheres 14.4
2436 Male, age 74, both hemispheres 13.2
2620 Female, age 94, left hemisphere 12.9
2861 Female, age 67, both hemispheres 12.9
Parahippocampal cortex
nTPM: 15.1
1850 Male, age 80, both hemispheres 18.6
1933 Female, age 85, both hemispheres 16.8
2250 Female, age 67, right hemisphere 16.2
1990 Female, age 91, right hemisphere 16.0
2693 Female, age 94, both hemispheres 16.0
2692 Male, age 74, both hemispheres 15.3
2245 Female, age 91, both hemispheres 13.8
2018 Male, age 76, both hemispheres 13.5
2532 Female, age 72, left hemisphere 13.3
2622 Female, age 67, right hemisphere 11.3
Perirhinal gyrus
nTPM: 17.1
1847 Female, age 91, left hemisphere 19.5
1794 Male, age 80, right hemisphere 18.1
1841 Female, age 85, right hemisphere 17.9
2848 Male, age 76, right hemisphere 15.5
2521 Female, age 94, right hemisphere 14.5
Subiculum
nTPM: 14.8
2438 Female, age 94, left hemisphere 21.0
1901 Male, age 80, both hemispheres 15.9
1977 Female, age 85, both hemispheres 14.3
2729 Female, age 91, right hemisphere 13.9
2619 Male, age 74, both hemispheres 12.8
2042 Male, age 76, both hemispheres 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 67.0
Min nTPM: 7.2
Std nTPM: 7.5
Median nTPM: 19.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 67.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 50.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 39.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 38.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 36.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 33.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 32.6
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 32.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 31.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.3
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 59.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.8
Pig sample Sample description nTPM
Subiculum
nTPM: 31.4
Samples: 4

Max nTPM: 36.7
Min nTPM: 28.5
Sample A Female 36.7
Sample B Female 30.6
Sample C Male 28.5
Sample D Male 29.9
Dorsal hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 35.6
Min nTPM: 31.5
Sample A Female 35.6
Sample B Female 32.2
Sample C Male 31.5
Sample D Male 32.6
Entorhinal cortex
nTPM: 34.8
Samples: 4

Max nTPM: 39.8
Min nTPM: 29.9
Sample A Female 39.8
Sample B Female 38.0
Sample C Male 29.9
Sample D Male 31.4
Ventral hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 36.6
Min nTPM: 27.2
Sample A Female 36.6
Sample B Female 30.1
Sample C Male 27.2
Sample D Male 29.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.0
Samples: 4

Max nTPM: 56.6
Min nTPM: 42.3
Sample A Male 52.8
Sample B Male 56.6
Sample C Female 56.3
Sample D Female 42.3
Hippocampal formation
nTPM: 49.9
Samples: 4

Max nTPM: 53.7
Min nTPM: 47.8
Sample A Male 53.7
Sample B Male 48.9
Sample C Female 47.8
Sample D Female 49.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69751986 Antisense, RP_050503_04_H04, Mouse strain C57BL/6J (56 days, male) 0.6

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