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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
179.3
nTPM
FANTOM5:
309.8
Scaled Tags Per Million
Pig:
130.7
nTPM
Allen mouse:
1.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
179.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 158.6
2301
Female, age 85, both hemispheres
192.8
2188
Female, age 91, both hemispheres
158.1
2090
Male, age 80, both hemispheres
149.6
1984
Male, age 76, both hemispheres
133.7
Dorsal cochlear nucleus nTPM: 156.3
2187
Female, age 91, both hemispheres
174.2
2802
Male, age 74, right hemisphere
166.3
2058
Male, age 76, both hemispheres
149.2
2370
Male, age 61, both hemispheres
146.9
2378
Male, age 80, both hemispheres
144.8
Dorsal tegmental nucleus nTPM: 174.2
2358
Male, age 61, both hemispheres
200.9
2326
Male, age 74, both hemispheres
172.6
2083
Male, age 80, both hemispheres
165.6
1936
Male, age 76, left hemisphere
157.7
Dorsolateral tegmental area nTPM: 161.8
2337
Male, age 61, both hemispheres
182.5
2654
Male, age 80, both hemispheres
165.7
2751
Female, age 85, both hemispheres
159.8
2360
Male, age 74, both hemispheres
157.0
2141
Male, age 76, both hemispheres
143.7
Kolliker-Fuse nucleus nTPM: 179.3
2315
Male, age 76, right hemisphere
198.2
2163
Male, age 80, both hemispheres
173.7
2793
Female, age 91, left hemisphere
166.0
Lateral lemniscal nuclei nTPM: 156.8
2036
Male, age 80, both hemispheres
165.9
2169
Male, age 76, both hemispheres
159.8
2746
Female, age 85, left hemisphere
153.8
2320
Female, age 91, left hemisphere
153.5
2453
Male, age 74, right hemisphere
151.0
Lateral parabrachial nucleus nTPM: 167.8
2792
Male, age 76, both hemispheres
190.7
2790
Male, age 61, both hemispheres
162.2
2013
Male, age 80, both hemispheres
161.9
2139
Female, age 85, right hemisphere
156.5
Lateral vestibular nucleus nTPM: 160.1
2311
Male, age 80, both hemispheres
161.8
2184
Male, age 76, both hemispheres
158.4
Locus coeruleus nTPM: 170.6
2014
Male, age 55, unknown
192.6
2123
Female, age 91, both hemispheres
188.9
2720
Male, age 74, both hemispheres
181.0
2788
Male, age 74, unknown
164.0
2162
Male, age 80, both hemispheres
160.6
1980
Male, age 76, both hemispheres
158.4
2317
Female, age 72, unknown
148.5
Medial parabrachial nucleus nTPM: 163.1
2854
Male, age 80, both hemispheres
191.4
2170
Female, age 91, both hemispheres
163.1
2156
Male, age 61, both hemispheres
159.3
2786
Male, age 76, both hemispheres
153.0
2463
Female, age 85, right hemisphere
148.6
Medial periolivary nuclei nTPM: 165.1
2171
Female, age 85, both hemispheres
190.5
2791
Male, age 74, right hemisphere
184.0
2063
Male, age 76, both hemispheres
159.2
2081
Male, age 80, both hemispheres
148.7
2458
Female, age 91, both hemispheres
142.8
Motor facial nucleus nTPM: 162.2
2365
Male, age 74, right hemisphere
182.7
2697
Female, age 85, both hemispheres
177.0
2062
Male, age 76, both hemispheres
158.6
2795
Female, age 91, both hemispheres
152.6
2327
Male, age 80, both hemispheres
151.7
2126
Male, age 61, both hemispheres
150.4
Motor trigeminal nucleus nTPM: 145.6
2079
Male, age 80, both hemispheres
147.9
2560
Male, age 74, both hemispheres
147.2
2335
Male, age 61, both hemispheres
145.3
2321
Female, age 91, both hemispheres
144.1
2309
Male, age 76, both hemispheres
143.6
Nuclei of the trapezoid body nTPM: 154.8
2735
Female, age 85, both hemispheres
164.6
1983
Male, age 76, both hemispheres
163.4
2159
Male, age 61, both hemispheres
159.4
2166
Male, age 80, both hemispheres
146.8
2368
Female, age 91, both hemispheres
139.5
Nucleus raphe magnus nTPM: 162.8
2172
Female, age 85, both hemispheres
178.0
2455
Male, age 74, both hemispheres
164.9
2051
Male, age 76, both hemispheres
161.1
2160
Male, age 61, both hemispheres
159.9
2328
Male, age 80, both hemispheres
158.1
2459
Female, age 91, both hemispheres
155.0
Paramedian reticular nucleus nTPM: 170.7
2052
Male, age 76, both hemispheres
187.9
2050
Female, age 85, both hemispheres
172.7
2313
Male, age 61, both hemispheres
170.0
2057
Male, age 80, both hemispheres
152.0
Pedunculopontine tegmental nucleus nTPM: 166.5
2338
Male, age 61, both hemispheres
181.1
2334
Male, age 80, both hemispheres
178.0
1921
Female, age 85, both hemispheres
140.4
Pontine nuclei nTPM: 171.5
1863
Male, age 55, unknown
193.8
2109
Female, age 72, unknown
189.1
2454
Male, age 74, left hemisphere
185.4
2787
Female, age 85, both hemispheres
176.7
2319
Female, age 91, both hemispheres
162.8
2727
Male, age 61, right hemisphere
162.7
1968
Male, age 76, left hemisphere
151.5
2115
Male, age 80, left hemisphere
149.9
Pontine raphe nucleus nTPM: 154.5
2122
Female, age 85, midline
163.4
2853
Male, age 76, midline
145.6
Posteroventral cochlear nucleus nTPM: 156.1
2341
Male, age 80, both hemispheres
163.5
2752
Female, age 85, both hemispheres
160.1
2070
Male, age 76, both hemispheres
160.0
2371
Male, age 61, both hemispheres
148.5
2135
Female, age 91, both hemispheres
148.4
Principal sensory trigeminal nucleus nTPM: 156.6
2324
Male, age 76, both hemispheres
166.7
2367
Female, age 91, left hemisphere
159.4
2158
Male, age 61, both hemispheres
152.9
2008
Male, age 80, left hemisphere
147.3
Reticular pontine nucleus, caudal nTPM: 151.7
2092
Male, age 76, both hemispheres
159.2
2559
Male, age 74, both hemispheres
154.8
2457
Female, age 91, both hemispheres
149.7
2332
Male, age 80, right hemisphere
143.1
Reticular pontine nucleus, oral nTPM: 164.9
2361
Male, age 74, both hemispheres
195.1
1939
Male, age 80, both hemispheres
163.7
2012
Female, age 85, both hemispheres
155.8
2167
Male, age 76, both hemispheres
155.5
2366
Female, age 91, both hemispheres
154.4
Reticulotegmental nucleus nTPM: 151.6
2322
Female, age 91, both hemispheres
166.4
2333
Male, age 80, both hemispheres
156.4
2325
Male, age 76, both hemispheres
146.1
2452
Male, age 74, both hemispheres
137.5
Spinal trigeminal nucleus, oral nTPM: 152.9
2164
Male, age 80, both hemispheres
163.1
2737
Female, age 85, both hemispheres
157.2
1978
Male, age 76, both hemispheres
138.3
Subcoeruleus area nTPM: 154.7
2323
Female, age 91, left hemisphere
172.7
1958
Male, age 80, both hemispheres
162.8
2369
Female, age 85, left hemisphere
162.6
2089
Male, age 76, left hemisphere
139.7
2451
Male, age 74, both hemispheres
135.6
Superior olive nTPM: 161.5
2364
Male, age 74, right hemisphere
183.1
1875
Female, age 85, both hemispheres
175.1
2329
Male, age 80, right hemisphere
154.0
2020
Male, age 76, both hemispheres
150.4
2561
Female, age 91, both hemispheres
144.9
Ventral periolivary nuclei nTPM: 169.0
2130
Female, age 85, both hemispheres
205.7
2023
Male, age 76, both hemispheres
159.9
2165
Male, age 80, both hemispheres
158.2
2794
Female, age 91, left hemisphere
152.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 162.8
2359
Male, age 61, both hemispheres
190.8
2840
Female, age 85, both hemispheres
186.6
2449
Male, age 74, both hemispheres
156.1
1959
Male, age 76, both hemispheres
154.5
2161
Male, age 80, both hemispheres
152.3
2456
Female, age 91, both hemispheres
136.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
130.7
Pig sample
Sample description
nTPM
Pons nTPM: 130.7
Samples: 4
Max nTPM: 140.5
Min nTPM: 107.4
Sample A
Female
136.0
Sample B
Female
107.4
Sample C
Male
140.5
Sample D
Male
139.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
