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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.2
nTPM
Monaco:
16.2
nTPM
Schmiedel:
33.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.2
HPA sample
nTPM
gdT-cell nTPM: 8.5
Samples: 6
Max nTPM: 13.6
Min nTPM: 6.0
P10809_1007
6.0
P10809_1022
6.3
P10809_1041
7.9
P10809_1060
9.5
P10809_1077
7.5
P10809_1098
13.6
MAIT T-cell nTPM: 11.6
Samples: 6
Max nTPM: 23.0
Min nTPM: 6.2
P10809_1006
6.2
P10809_1024
10.5
P10809_1043
9.4
P10809_1062
9.1
P10809_1083
23.0
P10809_1097
11.2
Memory CD4 T-cell nTPM: 11.7
Samples: 6
Max nTPM: 16.1
Min nTPM: 7.5
P10809_1014
10.5
P10809_1026
8.7
P10809_1045
7.5
P10809_1064
12.1
P10809_1086
15.1
P10809_1113
16.1
Memory CD8 T-cell nTPM: 11.5
Samples: 5
Max nTPM: 16.2
Min nTPM: 4.2
P10809_1012
10.1
P10809_1027
12.5
P10809_1046
4.2
P10809_1065
16.2
P10809_1111
14.3
Naive CD4 T-cell nTPM: 10.5
Samples: 6
Max nTPM: 14.3
Min nTPM: 7.3
P10809_1015
10.9
P10809_1030
10.3
P10809_1049
7.3
P10809_1068
8.0
P10809_1085
12.0
P10809_1112
14.3
Naive CD8 T-cell nTPM: 11.4
Samples: 6
Max nTPM: 14.1
Min nTPM: 8.7
P10809_1016
12.5
P10809_1031
9.6
P10809_1050
8.7
P10809_1069
10.8
P10809_1087
14.1
P10809_1110
12.6
T-reg nTPM: 18.2
Samples: 6
Max nTPM: 26.8
Min nTPM: 7.5
P10809_1018
7.5
P10809_1037
22.8
P10809_1056
21.1
P10809_1075
23.3
P10809_1094
7.6
P10809_1106
26.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 8.2
Samples: 4
Max nTPM: 15.3
Min nTPM: 2.0
RHH5202_R3573
15.3
RHH5230_R3602
7.0
RHH5259_R3631
8.4
RHH5288_R3660
2.0
Effector memory CD8 T-cell nTPM: 10.5
Samples: 4
Max nTPM: 17.7
Min nTPM: 4.9
RHH5203_R3574
6.4
RHH5231_R3603
4.9
RHH5260_R3632
12.8
RHH5289_R3661
17.7
MAIT T-cell nTPM: 6.1
Samples: 4
Max nTPM: 7.4
Min nTPM: 5.0
RHH5233_R3605
7.0
RHH5205_R3576
7.4
RHH5262_R3634
5.0
RHH5297_R3663
5.0
Memory CD4 T-cell TFH nTPM: 16.0
Samples: 4
Max nTPM: 22.4
Min nTPM: 12.2
RHH5300_R3666
15.8
RHH5236_R3608
12.2
RHH5265_R3637
13.4
RHH5208_R3579
22.4
Memory CD4 T-cell Th1 nTPM: 13.4
Samples: 4
Max nTPM: 18.2
Min nTPM: 10.4
RHH5210_R3581
14.5
RHH5302_R3668
10.4
RHH5238_R3610
10.5
RHH5267_R3639
18.2
Memory CD4 T-cell Th1/Th17 nTPM: 13.0
Samples: 4
Max nTPM: 17.5
Min nTPM: 6.8
RHH5303_R3669
10.5
RHH5211_R3582
17.5
RHH5239_R3611
6.8
RHH5268_R3640
17.2
Memory CD4 T-cell Th17 nTPM: 14.0
Samples: 4
Max nTPM: 26.8
Min nTPM: 4.0
RHH5304_R3670
26.8
RHH5212_R3583
4.0
RHH5240_R3612
12.5
RHH5269_R3641
12.5
Memory CD4 T-cell Th2 nTPM: 10.3
Samples: 4
Max nTPM: 14.9
Min nTPM: 5.5
RHH5305_R3671
12.7
RHH5213_R3584
5.5
RHH5241_R3613
8.2
RHH5270_R3642
14.9
Naive CD4 T-cell nTPM: 16.2
Samples: 4
Max nTPM: 23.9
Min nTPM: 6.6
RHH5306_R3672
6.6
RHH5214_R3585
18.1
RHH5242_R3614
23.9
RHH5271_R3643
16.2
Naive CD8 T-cell nTPM: 10.2
Samples: 4
Max nTPM: 15.5
Min nTPM: 6.8
RHH5201_R3572
9.0
RHH5229_R3601
15.5
RHH5258_R3630
9.6
RHH5287_R3659
6.8
Non-Vd2 gdTCR nTPM: 9.4
Samples: 4
Max nTPM: 17.9
Min nTPM: 5.3
RHH5235_R3607
5.3
RHH5264_R3636
17.9
RHH5207_R3578
7.6
RHH5299_R3665
6.9
T-reg nTPM: 14.3
Samples: 4
Max nTPM: 20.1
Min nTPM: 6.5
RHH5301_R3667
20.1
RHH5237_R3609
16.5
RHH5266_R3638
14.1
RHH5209_R3580
6.5
Terminal effector memory CD4 T-cell nTPM: 12.7
Samples: 2
Max nTPM: 15.3
Min nTPM: 10.1
RHH5243_R3615
15.3
RHH5272_R3644
10.1
Terminal effector memory CD8 T-cell nTPM: 9.1
Samples: 4
Max nTPM: 14.6
Min nTPM: 3.8
RHH5232_R3604
14.6
RHH5204_R3575
6.3
RHH5261_R3633
11.5
RHH5296_R3662
3.8
Vd2 gdTCR nTPM: 6.0
Samples: 4
Max nTPM: 7.9
Min nTPM: 3.6
RHH5234_R3606
7.9
RHH5206_R3577
7.2
RHH5263_R3635
3.6
RHH5298_R3664
5.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
