We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.2
nTPM
Monaco:
279.0
nTPM
Schmiedel:
122.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.2
HPA sample
nTPM
gdT-cell nTPM: 5.2
Samples: 6
Max nTPM: 7.7
Min nTPM: 3.4
P10809_1007
3.5
P10809_1022
6.6
P10809_1041
3.9
P10809_1060
5.8
P10809_1077
7.7
P10809_1098
3.4
MAIT T-cell nTPM: 10.1
Samples: 6
Max nTPM: 13.4
Min nTPM: 5.0
P10809_1006
13.4
P10809_1024
9.5
P10809_1043
8.4
P10809_1062
12.1
P10809_1083
11.9
P10809_1097
5.0
Memory CD4 T-cell nTPM: 30.2
Samples: 6
Max nTPM: 40.4
Min nTPM: 22.8
P10809_1014
26.4
P10809_1026
40.4
P10809_1045
33.8
P10809_1064
22.8
P10809_1086
23.9
P10809_1113
33.6
Memory CD8 T-cell nTPM: 13.5
Samples: 5
Max nTPM: 17.2
Min nTPM: 8.4
P10809_1012
16.7
P10809_1027
17.2
P10809_1046
9.9
P10809_1065
8.4
P10809_1111
15.2
Naive CD4 T-cell nTPM: 20.4
Samples: 6
Max nTPM: 30.1
Min nTPM: 10.6
P10809_1015
19.2
P10809_1030
20.4
P10809_1049
24.1
P10809_1068
30.1
P10809_1085
10.6
P10809_1112
18.0
Naive CD8 T-cell nTPM: 8.9
Samples: 6
Max nTPM: 11.0
Min nTPM: 6.5
P10809_1016
6.5
P10809_1031
8.3
P10809_1050
8.2
P10809_1069
8.7
P10809_1087
10.4
P10809_1110
11.0
T-reg nTPM: 17.3
Samples: 6
Max nTPM: 22.8
Min nTPM: 12.6
P10809_1018
13.6
P10809_1037
17.9
P10809_1056
22.8
P10809_1075
12.6
P10809_1094
17.9
P10809_1106
18.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
279.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 169.2
Samples: 4
Max nTPM: 184.5
Min nTPM: 150.8
RHH5202_R3573
178.0
RHH5230_R3602
150.8
RHH5259_R3631
163.4
RHH5288_R3660
184.5
Effector memory CD8 T-cell nTPM: 99.8
Samples: 4
Max nTPM: 110.8
Min nTPM: 87.3
RHH5203_R3574
108.8
RHH5231_R3603
87.3
RHH5260_R3632
92.2
RHH5289_R3661
110.8
MAIT T-cell nTPM: 73.0
Samples: 4
Max nTPM: 105.4
Min nTPM: 52.9
RHH5233_R3605
105.4
RHH5205_R3576
75.3
RHH5262_R3634
52.9
RHH5297_R3663
58.4
Memory CD4 T-cell TFH nTPM: 263.3
Samples: 4
Max nTPM: 294.2
Min nTPM: 224.8
RHH5300_R3666
247.4
RHH5236_R3608
224.8
RHH5265_R3637
294.2
RHH5208_R3579
286.8
Memory CD4 T-cell Th1 nTPM: 218.6
Samples: 4
Max nTPM: 242.5
Min nTPM: 203.0
RHH5210_R3581
242.5
RHH5302_R3668
203.0
RHH5238_R3610
216.8
RHH5267_R3639
211.9
Memory CD4 T-cell Th1/Th17 nTPM: 225.5
Samples: 4
Max nTPM: 326.5
Min nTPM: 177.8
RHH5303_R3669
194.2
RHH5211_R3582
177.8
RHH5239_R3611
326.5
RHH5268_R3640
203.4
Memory CD4 T-cell Th17 nTPM: 219.1
Samples: 4
Max nTPM: 268.2
Min nTPM: 166.8
RHH5304_R3670
166.8
RHH5212_R3583
202.4
RHH5240_R3612
268.2
RHH5269_R3641
238.9
Memory CD4 T-cell Th2 nTPM: 279.0
Samples: 4
Max nTPM: 335.1
Min nTPM: 248.0
RHH5305_R3671
248.0
RHH5213_R3584
284.5
RHH5241_R3613
335.1
RHH5270_R3642
248.2
Naive CD4 T-cell nTPM: 164.2
Samples: 4
Max nTPM: 182.0
Min nTPM: 142.1
RHH5306_R3672
161.6
RHH5214_R3585
171.0
RHH5242_R3614
182.0
RHH5271_R3643
142.1
Naive CD8 T-cell nTPM: 85.3
Samples: 4
Max nTPM: 101.7
Min nTPM: 66.8
RHH5201_R3572
101.7
RHH5229_R3601
66.8
RHH5258_R3630
73.3
RHH5287_R3659
99.2
Non-Vd2 gdTCR nTPM: 35.1
Samples: 4
Max nTPM: 42.9
Min nTPM: 27.9
RHH5235_R3607
29.6
RHH5264_R3636
42.9
RHH5207_R3578
27.9
RHH5299_R3665
39.8
T-reg nTPM: 170.5
Samples: 4
Max nTPM: 202.4
Min nTPM: 138.1
RHH5301_R3667
138.1
RHH5237_R3609
202.4
RHH5266_R3638
143.8
RHH5209_R3580
197.8
Terminal effector memory CD4 T-cell nTPM: 85.0
Samples: 2
Max nTPM: 109.9
Min nTPM: 60.0
RHH5243_R3615
60.0
RHH5272_R3644
109.9
Terminal effector memory CD8 T-cell nTPM: 55.0
Samples: 4
Max nTPM: 72.9
Min nTPM: 39.7
RHH5232_R3604
64.6
RHH5204_R3575
42.9
RHH5261_R3633
39.7
RHH5296_R3662
72.9
Vd2 gdTCR nTPM: 70.7
Samples: 4
Max nTPM: 100.6
Min nTPM: 17.1
RHH5234_R3606
100.6
RHH5206_R3577
17.1
RHH5263_R3635
80.4
RHH5298_R3664
84.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
