HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:56.0 nTPM
HPA Brain:154.0 nTPM
GTEx:56.0 nTPM
FANTOM5:116.2 Scaled Tags Per Million
Pig:95.8 nTPM
Mouse:178.3 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 154.0
Sample id Sample description nTPM
Hippocampus
nTPM: 123.6
1855 Male, age 76, left hemisphere 153.5
1898 Male, age 80, left hemisphere 152.9
2148 Female, age 91, left hemisphere 141.1
1911 Female, age 85, right hemisphere 108.9
2621 Female, age 67, right hemisphere 108.3
2529 Female, age 94, left hemisphere 76.6
Dentate gyrus
nTPM: 120.1
2010 Male, age 76, both hemispheres 160.0
1927 Female, age 91, both hemispheres 151.2
2530 Female, age 94, left hemisphere 117.7
2531 Female, age 67, both hemispheres 117.2
2246 Female, age 85, both hemispheres 105.5
2528 Male, age 74, both hemispheres 68.8
Entorhinal gyrus
nTPM: 61.6
1938 Female, age 85, left hemisphere 76.5
2686 Male, age 75, right hemisphere 66.9
2764 Male, age 80, right hemisphere 61.6
2613 Female, age 94, left hemisphere 57.6
2117 Female, age 91, right hemisphere 55.3
1787 Male, age 76, left hemisphere 51.6
Hippocampus, CA1
nTPM: 154.0
2749 Male, age 80, left hemisphere 257.5
2045 Male, age 76, both hemispheres 223.9
1873 Female, age 85, both hemispheres 160.5
2527 Male, age 74, both hemispheres 68.8
2082 Female, age 91, right hemisphere 59.3
Hippocampus, CA2
nTPM: 100.3
1963 Male, age 80, left hemisphere 182.6
1892 Male, age 76, both hemispheres 160.8
2437 Female, age 94, left hemisphere 71.0
1940 Female, age 85, left hemisphere 68.2
2113 Female, age 91, right hemisphere 64.1
2249 Male, age 74, both hemispheres 54.9
Hippocampus, CA3
nTPM: 124.0
2137 Male, age 80, left hemisphere 209.1
2620 Female, age 94, left hemisphere 139.3
1867 Male, age 76, both hemispheres 131.7
2861 Female, age 67, both hemispheres 102.6
1891 Female, age 85, both hemispheres 100.1
2436 Male, age 74, both hemispheres 61.2
Parahippocampal cortex
nTPM: 61.4
2018 Male, age 76, both hemispheres 85.2
1850 Male, age 80, both hemispheres 81.5
2245 Female, age 91, both hemispheres 66.7
1933 Female, age 85, both hemispheres 65.7
2532 Female, age 72, left hemisphere 64.9
2693 Female, age 94, both hemispheres 55.5
1990 Female, age 91, right hemisphere 50.9
2250 Female, age 67, right hemisphere 49.3
2692 Male, age 74, both hemispheres 49.3
2622 Female, age 67, right hemisphere 45.2
Perirhinal gyrus
nTPM: 70.1
1794 Male, age 80, right hemisphere 83.2
1841 Female, age 85, right hemisphere 74.8
1847 Female, age 91, left hemisphere 66.8
2848 Male, age 76, right hemisphere 64.5
2521 Female, age 94, right hemisphere 60.9
Subiculum
nTPM: 75.5
1901 Male, age 80, both hemispheres 111.5
2042 Male, age 76, both hemispheres 87.1
2729 Female, age 91, right hemisphere 82.4
2438 Female, age 94, left hemisphere 70.5
1977 Female, age 85, both hemispheres 63.0
2619 Male, age 74, both hemispheres 38.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.0
Samples: 197

Max nTPM: 193.5
Min nTPM: 8.6
Std nTPM: 24.2
Median nTPM: 51.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 193.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 129.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 129.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 128.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 122.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 118.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 118.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 113.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 105.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 104.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 103.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.2
FF:10169-103B7 60 years, female 153.7
FF:10153-102I9 76 years, female 78.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 95.8
Pig sample Sample description nTPM
Subiculum
nTPM: 43.7
Samples: 4

Max nTPM: 52.2
Min nTPM: 35.4
Sample A Female 52.2
Sample B Female 43.0
Sample C Male 35.4
Sample D Male 44.0
Dorsal hippocampus
nTPM: 95.8
Samples: 4

Max nTPM: 124.2
Min nTPM: 50.3
Sample A Female 124.2
Sample B Female 106.6
Sample C Male 50.3
Sample D Male 102.0
Entorhinal cortex
nTPM: 59.2
Samples: 4

Max nTPM: 72.3
Min nTPM: 50.1
Sample A Female 58.8
Sample B Female 72.3
Sample C Male 55.6
Sample D Male 50.1
Ventral hippocampus
nTPM: 72.4
Samples: 4

Max nTPM: 90.9
Min nTPM: 53.2
Sample A Female 90.9
Sample B Female 53.2
Sample C Male 59.8
Sample D Male 85.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 178.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.9
Samples: 4

Max nTPM: 109.6
Min nTPM: 90.4
Sample A Male 99.1
Sample B Male 92.4
Sample C Female 109.6
Sample D Female 90.4
Hippocampal formation
nTPM: 178.3
Samples: 4

Max nTPM: 220.5
Min nTPM: 149.2
Sample A Male 149.2
Sample B Male 189.9
Sample C Female 220.5
Sample D Female 153.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
73584837 Antisense, RP_051206_01_C05, Mouse strain C57BL/6J (56 days, male) 14.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org