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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
20.3
nTPM
Monaco:
14.9
nTPM
Schmiedel:
60.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.3
HPA sample
nTPM
gdT-cell nTPM: 13.6
Samples: 6
Max nTPM: 17.2
Min nTPM: 10.5
P10809_1007
12.7
P10809_1022
10.5
P10809_1041
14.1
P10809_1060
13.6
P10809_1077
17.2
P10809_1098
13.7
MAIT T-cell nTPM: 13.8
Samples: 6
Max nTPM: 17.0
Min nTPM: 9.9
P10809_1006
10.8
P10809_1024
16.0
P10809_1043
9.9
P10809_1062
13.8
P10809_1083
15.5
P10809_1097
17.0
Memory CD4 T-cell nTPM: 16.0
Samples: 6
Max nTPM: 18.0
Min nTPM: 14.9
P10809_1014
15.0
P10809_1026
14.9
P10809_1045
15.8
P10809_1064
17.2
P10809_1086
18.0
P10809_1113
15.0
Memory CD8 T-cell nTPM: 15.1
Samples: 5
Max nTPM: 17.5
Min nTPM: 11.3
P10809_1012
14.1
P10809_1027
17.5
P10809_1046
11.3
P10809_1065
17.1
P10809_1111
15.7
Naive CD4 T-cell nTPM: 13.8
Samples: 6
Max nTPM: 15.0
Min nTPM: 12.4
P10809_1015
14.0
P10809_1030
14.2
P10809_1049
14.0
P10809_1068
15.0
P10809_1085
12.9
P10809_1112
12.4
Naive CD8 T-cell nTPM: 14.8
Samples: 6
Max nTPM: 17.7
Min nTPM: 12.2
P10809_1016
12.2
P10809_1031
15.0
P10809_1050
15.3
P10809_1069
15.1
P10809_1087
17.7
P10809_1110
13.7
T-reg nTPM: 20.3
Samples: 6
Max nTPM: 25.0
Min nTPM: 17.3
P10809_1018
17.8
P10809_1037
24.3
P10809_1056
19.4
P10809_1075
17.3
P10809_1094
17.7
P10809_1106
25.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 6.0
Samples: 4
Max nTPM: 7.9
Min nTPM: 4.8
RHH5202_R3573
7.9
RHH5230_R3602
4.8
RHH5259_R3631
4.9
RHH5288_R3660
6.2
Effector memory CD8 T-cell nTPM: 11.6
Samples: 4
Max nTPM: 15.8
Min nTPM: 5.3
RHH5203_R3574
12.0
RHH5231_R3603
15.8
RHH5260_R3632
13.1
RHH5289_R3661
5.3
MAIT T-cell nTPM: 5.5
Samples: 4
Max nTPM: 8.9
Min nTPM: 3.7
RHH5233_R3605
4.5
RHH5205_R3576
4.8
RHH5262_R3634
3.7
RHH5297_R3663
8.9
Memory CD4 T-cell TFH nTPM: 12.3
Samples: 4
Max nTPM: 17.5
Min nTPM: 6.1
RHH5300_R3666
6.1
RHH5236_R3608
14.9
RHH5265_R3637
10.7
RHH5208_R3579
17.5
Memory CD4 T-cell Th1 nTPM: 8.6
Samples: 4
Max nTPM: 13.7
Min nTPM: 6.0
RHH5210_R3581
7.1
RHH5302_R3668
13.7
RHH5238_R3610
6.0
RHH5267_R3639
7.7
Memory CD4 T-cell Th1/Th17 nTPM: 10.5
Samples: 4
Max nTPM: 16.3
Min nTPM: 5.9
RHH5303_R3669
16.3
RHH5211_R3582
13.3
RHH5239_R3611
5.9
RHH5268_R3640
6.4
Memory CD4 T-cell Th17 nTPM: 9.3
Samples: 4
Max nTPM: 12.6
Min nTPM: 4.4
RHH5304_R3670
12.6
RHH5212_R3583
12.0
RHH5240_R3612
4.4
RHH5269_R3641
8.3
Memory CD4 T-cell Th2 nTPM: 8.9
Samples: 4
Max nTPM: 12.2
Min nTPM: 5.9
RHH5305_R3671
5.9
RHH5213_R3584
11.2
RHH5241_R3613
12.2
RHH5270_R3642
6.4
Naive CD4 T-cell nTPM: 10.5
Samples: 4
Max nTPM: 12.0
Min nTPM: 9.2
RHH5306_R3672
10.5
RHH5214_R3585
9.2
RHH5242_R3614
10.3
RHH5271_R3643
12.0
Naive CD8 T-cell nTPM: 10.0
Samples: 4
Max nTPM: 13.8
Min nTPM: 7.2
RHH5201_R3572
11.4
RHH5229_R3601
7.5
RHH5258_R3630
13.8
RHH5287_R3659
7.2
Non-Vd2 gdTCR nTPM: 8.9
Samples: 4
Max nTPM: 18.0
Min nTPM: 2.9
RHH5235_R3607
2.9
RHH5264_R3636
18.0
RHH5207_R3578
8.8
RHH5299_R3665
5.8
T-reg nTPM: 14.9
Samples: 4
Max nTPM: 17.4
Min nTPM: 10.1
RHH5301_R3667
16.6
RHH5237_R3609
17.4
RHH5266_R3638
10.1
RHH5209_R3580
15.4
Terminal effector memory CD4 T-cell nTPM: 6.6
Samples: 2
Max nTPM: 8.3
Min nTPM: 4.8
RHH5243_R3615
4.8
RHH5272_R3644
8.3
Terminal effector memory CD8 T-cell nTPM: 10.7
Samples: 4
Max nTPM: 15.1
Min nTPM: 6.2
RHH5232_R3604
10.7
RHH5204_R3575
15.1
RHH5261_R3633
10.6
RHH5296_R3662
6.2
Vd2 gdTCR nTPM: 12.9
Samples: 4
Max nTPM: 22.6
Min nTPM: 8.1
RHH5234_R3606
8.1
RHH5206_R3577
22.6
RHH5263_R3635
11.8
RHH5298_R3664
9.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
