HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:70.9 nTPM
HPA Brain:202.7 nTPM
GTEx:70.9 nTPM
FANTOM5:308.3 Scaled Tags Per Million
Pig:145.7 nTPM
Mouse:113.3 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035853Antibody HPA035854
Glial cells LowHigh
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 202.7
Sample id Sample description nTPM
Hippocampus
nTPM: 174.4
1898 Male, age 80, left hemisphere 214.7
1855 Male, age 76, left hemisphere 179.0
2529 Female, age 94, left hemisphere 174.0
1911 Female, age 85, right hemisphere 166.7
2621 Female, age 67, right hemisphere 165.9
2148 Female, age 91, left hemisphere 146.2
Dentate gyrus
nTPM: 169.2
2010 Male, age 76, both hemispheres 216.5
2530 Female, age 94, left hemisphere 183.0
1927 Female, age 91, both hemispheres 168.4
2528 Male, age 74, both hemispheres 162.7
2246 Female, age 85, both hemispheres 148.1
2531 Female, age 67, both hemispheres 136.3
Entorhinal gyrus
nTPM: 174.0
2764 Male, age 80, right hemisphere 220.8
2117 Female, age 91, right hemisphere 183.1
1787 Male, age 76, left hemisphere 169.9
2613 Female, age 94, left hemisphere 168.6
1938 Female, age 85, left hemisphere 167.2
2686 Male, age 75, right hemisphere 134.5
Hippocampus, CA1
nTPM: 202.7
2749 Male, age 80, left hemisphere 388.1
1873 Female, age 85, both hemispheres 178.5
2527 Male, age 74, both hemispheres 167.1
2082 Female, age 91, right hemisphere 140.1
2045 Male, age 76, both hemispheres 139.6
Hippocampus, CA2
nTPM: 184.6
1963 Male, age 80, left hemisphere 280.9
1892 Male, age 76, both hemispheres 220.3
2249 Male, age 74, both hemispheres 187.8
2437 Female, age 94, left hemisphere 153.2
2113 Female, age 91, right hemisphere 149.4
1940 Female, age 85, left hemisphere 116.1
Hippocampus, CA3
nTPM: 173.5
2137 Male, age 80, left hemisphere 269.5
1867 Male, age 76, both hemispheres 205.6
1891 Female, age 85, both hemispheres 174.0
2620 Female, age 94, left hemisphere 153.2
2436 Male, age 74, both hemispheres 125.3
2861 Female, age 67, both hemispheres 113.6
Parahippocampal cortex
nTPM: 151.2
1850 Male, age 80, both hemispheres 194.2
1990 Female, age 91, right hemisphere 173.8
2532 Female, age 72, left hemisphere 170.5
2018 Male, age 76, both hemispheres 169.5
2692 Male, age 74, both hemispheres 165.7
2245 Female, age 91, both hemispheres 155.3
1933 Female, age 85, both hemispheres 150.9
2693 Female, age 94, both hemispheres 118.3
2250 Female, age 67, right hemisphere 113.8
2622 Female, age 67, right hemisphere 100.4
Perirhinal gyrus
nTPM: 163.8
1847 Female, age 91, left hemisphere 196.9
1794 Male, age 80, right hemisphere 186.1
2521 Female, age 94, right hemisphere 150.6
2848 Male, age 76, right hemisphere 149.8
1841 Female, age 85, right hemisphere 135.5
Subiculum
nTPM: 181.6
1901 Male, age 80, both hemispheres 215.1
2042 Male, age 76, both hemispheres 202.3
1977 Female, age 85, both hemispheres 191.5
2438 Female, age 94, left hemisphere 190.6
2619 Male, age 74, both hemispheres 153.7
2729 Female, age 91, right hemisphere 136.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.9
Samples: 197

Max nTPM: 162.1
Min nTPM: 14.8
Std nTPM: 22.9
Median nTPM: 67.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 162.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 160.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 144.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 141.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 123.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 123.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 115.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 114.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 113.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 113.5
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 110.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 308.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 308.3
FF:10169-103B7 60 years, female 325.0
FF:10153-102I9 76 years, female 291.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 145.7
Pig sample Sample description nTPM
Subiculum
nTPM: 118.1
Samples: 4

Max nTPM: 148.2
Min nTPM: 99.9
Sample A Female 148.2
Sample B Female 108.6
Sample C Male 115.6
Sample D Male 99.9
Dorsal hippocampus
nTPM: 145.7
Samples: 4

Max nTPM: 176.7
Min nTPM: 103.3
Sample A Female 176.7
Sample B Female 152.8
Sample C Male 149.8
Sample D Male 103.3
Entorhinal cortex
nTPM: 115.6
Samples: 4

Max nTPM: 122.4
Min nTPM: 109.9
Sample A Female 122.4
Sample B Female 118.3
Sample C Male 111.8
Sample D Male 109.9
Ventral hippocampus
nTPM: 124.9
Samples: 4

Max nTPM: 160.5
Min nTPM: 93.8
Sample A Female 126.6
Sample B Female 93.8
Sample C Male 118.7
Sample D Male 160.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 113.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.9
Samples: 4

Max nTPM: 80.0
Min nTPM: 60.5
Sample A Male 68.5
Sample B Male 60.5
Sample C Female 74.7
Sample D Female 80.0
Hippocampal formation
nTPM: 113.3
Samples: 4

Max nTPM: 145.7
Min nTPM: 88.2
Sample A Male 90.7
Sample B Male 128.6
Sample C Female 145.7
Sample D Female 88.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
69838371 Antisense, RP_050301_02_G03, Mouse strain C57BL/6J (56 days, male) 12.7

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