We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
219.2
nTPM
FANTOM5:
486.4
Scaled Tags Per Million
Pig:
127.8
nTPM
Allen mouse:
10.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
219.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 168.9
2188
Female, age 91, both hemispheres
207.7
2090
Male, age 80, both hemispheres
165.9
2301
Female, age 85, both hemispheres
160.6
1984
Male, age 76, both hemispheres
141.2
Dorsal cochlear nucleus nTPM: 145.1
2802
Male, age 74, right hemisphere
173.3
2187
Female, age 91, both hemispheres
151.1
2378
Male, age 80, both hemispheres
139.4
2370
Male, age 61, both hemispheres
132.4
2058
Male, age 76, both hemispheres
129.4
Dorsal tegmental nucleus nTPM: 139.7
2083
Male, age 80, both hemispheres
185.7
2326
Male, age 74, both hemispheres
167.1
1936
Male, age 76, left hemisphere
119.2
2358
Male, age 61, both hemispheres
87.0
Dorsolateral tegmental area nTPM: 144.4
2654
Male, age 80, both hemispheres
183.6
2751
Female, age 85, both hemispheres
179.3
2360
Male, age 74, both hemispheres
147.3
2141
Male, age 76, both hemispheres
127.7
2337
Male, age 61, both hemispheres
84.0
Kolliker-Fuse nucleus nTPM: 184.0
2793
Female, age 91, left hemisphere
248.0
2163
Male, age 80, both hemispheres
158.3
2315
Male, age 76, right hemisphere
145.6
Lateral lemniscal nuclei nTPM: 191.5
2169
Male, age 76, both hemispheres
226.2
2320
Female, age 91, left hemisphere
195.8
2036
Male, age 80, both hemispheres
186.0
2746
Female, age 85, left hemisphere
185.2
2453
Male, age 74, right hemisphere
164.5
Lateral parabrachial nucleus nTPM: 170.6
2139
Female, age 85, right hemisphere
219.8
2013
Male, age 80, both hemispheres
176.2
2792
Male, age 76, both hemispheres
159.5
2790
Male, age 61, both hemispheres
126.9
Lateral vestibular nucleus nTPM: 145.8
2184
Male, age 76, both hemispheres
153.5
2311
Male, age 80, both hemispheres
138.2
Locus coeruleus nTPM: 148.8
2014
Male, age 55, unknown
162.0
2123
Female, age 91, both hemispheres
156.2
1980
Male, age 76, both hemispheres
156.0
2162
Male, age 80, both hemispheres
154.0
2720
Male, age 74, both hemispheres
143.9
2317
Female, age 72, unknown
135.9
2788
Male, age 74, unknown
133.4
Medial parabrachial nucleus nTPM: 153.0
2463
Female, age 85, right hemisphere
205.6
2170
Female, age 91, both hemispheres
161.2
2854
Male, age 80, both hemispheres
151.2
2786
Male, age 76, both hemispheres
129.9
2156
Male, age 61, both hemispheres
117.1
Medial periolivary nuclei nTPM: 185.4
2063
Male, age 76, both hemispheres
234.0
2791
Male, age 74, right hemisphere
189.9
2171
Female, age 85, both hemispheres
187.7
2458
Female, age 91, both hemispheres
165.3
2081
Male, age 80, both hemispheres
150.3
Motor facial nucleus nTPM: 183.0
2062
Male, age 76, both hemispheres
240.3
2365
Male, age 74, right hemisphere
198.6
2697
Female, age 85, both hemispheres
198.1
2126
Male, age 61, both hemispheres
158.7
2795
Female, age 91, both hemispheres
156.4
2327
Male, age 80, both hemispheres
145.8
Motor trigeminal nucleus nTPM: 148.7
2560
Male, age 74, both hemispheres
195.3
2079
Male, age 80, both hemispheres
160.9
2321
Female, age 91, both hemispheres
143.3
2309
Male, age 76, both hemispheres
136.2
2335
Male, age 61, both hemispheres
108.0
Nuclei of the trapezoid body nTPM: 192.9
2159
Male, age 61, both hemispheres
214.9
1983
Male, age 76, both hemispheres
214.2
2166
Male, age 80, both hemispheres
182.5
2735
Female, age 85, both hemispheres
178.0
2368
Female, age 91, both hemispheres
174.6
Nucleus raphe magnus nTPM: 184.3
2160
Male, age 61, both hemispheres
224.0
2172
Female, age 85, both hemispheres
185.0
2455
Male, age 74, both hemispheres
182.5
2459
Female, age 91, both hemispheres
177.3
2328
Male, age 80, both hemispheres
171.4
2051
Male, age 76, both hemispheres
165.5
Paramedian reticular nucleus nTPM: 154.6
2050
Female, age 85, both hemispheres
178.8
2057
Male, age 80, both hemispheres
171.0
2313
Male, age 61, both hemispheres
144.6
2052
Male, age 76, both hemispheres
124.1
Pedunculopontine tegmental nucleus nTPM: 126.9
1921
Female, age 85, both hemispheres
147.6
2334
Male, age 80, both hemispheres
141.3
2338
Male, age 61, both hemispheres
91.7
Pontine nuclei nTPM: 219.2
2787
Female, age 85, both hemispheres
258.2
2454
Male, age 74, left hemisphere
256.7
1863
Male, age 55, unknown
238.5
2109
Female, age 72, unknown
223.2
2727
Male, age 61, right hemisphere
222.1
1968
Male, age 76, left hemisphere
218.5
2319
Female, age 91, both hemispheres
181.6
2115
Male, age 80, left hemisphere
154.7
Pontine raphe nucleus nTPM: 162.5
2122
Female, age 85, midline
183.0
2853
Male, age 76, midline
142.1
Posteroventral cochlear nucleus nTPM: 163.6
2135
Female, age 91, both hemispheres
220.8
2752
Female, age 85, both hemispheres
164.7
2070
Male, age 76, both hemispheres
157.6
2341
Male, age 80, both hemispheres
142.9
2371
Male, age 61, both hemispheres
132.1
Principal sensory trigeminal nucleus nTPM: 177.0
2158
Male, age 61, both hemispheres
223.9
2367
Female, age 91, left hemisphere
190.9
2008
Male, age 80, left hemisphere
159.6
2324
Male, age 76, both hemispheres
133.8
Reticular pontine nucleus, caudal nTPM: 186.6
2559
Male, age 74, both hemispheres
210.7
2092
Male, age 76, both hemispheres
203.8
2457
Female, age 91, both hemispheres
180.5
2332
Male, age 80, right hemisphere
151.2
Reticular pontine nucleus, oral nTPM: 180.3
2366
Female, age 91, both hemispheres
214.9
2012
Female, age 85, both hemispheres
193.8
2361
Male, age 74, both hemispheres
182.8
1939
Male, age 80, both hemispheres
157.6
2167
Male, age 76, both hemispheres
152.6
Reticulotegmental nucleus nTPM: 149.6
2452
Male, age 74, both hemispheres
180.5
2325
Male, age 76, both hemispheres
152.9
2333
Male, age 80, both hemispheres
133.2
2322
Female, age 91, both hemispheres
131.7
Spinal trigeminal nucleus, oral nTPM: 136.8
1978
Male, age 76, both hemispheres
140.1
2164
Male, age 80, both hemispheres
137.8
2737
Female, age 85, both hemispheres
132.3
Subcoeruleus area nTPM: 163.4
2369
Female, age 85, left hemisphere
185.4
2089
Male, age 76, left hemisphere
173.8
2451
Male, age 74, both hemispheres
164.8
1958
Male, age 80, both hemispheres
159.4
2323
Female, age 91, left hemisphere
133.4
Superior olive nTPM: 191.0
1875
Female, age 85, both hemispheres
211.6
2364
Male, age 74, right hemisphere
206.1
2020
Male, age 76, both hemispheres
188.4
2561
Female, age 91, both hemispheres
176.5
2329
Male, age 80, right hemisphere
172.3
Ventral periolivary nuclei nTPM: 175.8
2023
Male, age 76, both hemispheres
203.2
2130
Female, age 85, both hemispheres
189.8
2165
Male, age 80, both hemispheres
171.0
2794
Female, age 91, left hemisphere
139.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 168.2
1959
Male, age 76, both hemispheres
182.7
2456
Female, age 91, both hemispheres
176.5
2449
Male, age 74, both hemispheres
174.2
2840
Female, age 85, both hemispheres
162.8
2359
Male, age 61, both hemispheres
158.2
2161
Male, age 80, both hemispheres
155.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
127.8
Pig sample
Sample description
nTPM
Pons nTPM: 127.9
Samples: 4
Max nTPM: 135.8
Min nTPM: 114.6
Sample A
Female
135.3
Sample B
Female
114.6
Sample C
Male
125.7
Sample D
Male
135.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
