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CLNK
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PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CLNK
Synonyms MIST
Gene descriptioni

Full gene name according to HGNC.

Cytokine dependent hematopoietic cell linker
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband p16.1
Chromosome location (bp) 10486395 - 10684768
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000109684 (version 109)
Entrez gene 116449
HGNC HGNC:17438
UniProt Q7Z7G1 (UniProt - Evidence at protein level)
neXtProt NX_Q7Z7G1
GeneCards CLNK
Antibodypedia CLNK antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

An adapter protein which plays a role in the regulation of immunoreceptor signaling, including PLC-gamma-mediated B-cell antigen receptor (BCR) signaling and FC-epsilon R1-mediated mast cell degranulation (By similarity). Together with FGR, it acts as a negative regulator of natural killer cell-activating receptors and inhibits interferon-gamma production (By similarity). Acts as a positive regulator of both T-cell receptor and natural killer T (NKT) cell receptor signaling in CD4-positive NKT cells (By similarity). Together with MAP4K1, it enhances CD3-triggered activation of T-cells and subsequent IL2 production (By similarity). May be involved in tumor necrosis factor induced cell death by promoting reactive oxidative species generation, and MLKL oligomerization, ultimately leading to necrosis (By similarity). Involved in phosphorylation of LAT (By similarity). May be involved in high affinity immunoglobulin epsilon receptor signaling in mast cells (By similarity).... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

MIST is a member of the SLP76 family of adaptors (see LCP2, MIM 601603; BLNK, MIM 604515). MIST plays a role in the regulation of immunoreceptor signaling, including PLC-gamma (PLCG1; MIM 172420)-mediated B cell antigen receptor (BCR) signaling and FC-epsilon R1 (see FCER1A, MIM 147140)-mediated mast cell degranulation (Cao et al., 1999 [PubMed 10562326]; Goitsuka et al., 2000, 2001 [PubMed 10744659]).[supplied by OMIM, Mar 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CLNK-201
ENSP00000226951
ENST00000226951
Q7Z7G1
[Direct mapping] Cytokine-dependent hematopoietic cell linker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002729 [positive regulation of natural killer cell cytokine production]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0010941 [regulation of cell death]
GO:0032815 [negative regulation of natural killer cell activation]
GO:0032991 [protein-containing complex]
GO:0035556 [intracellular signal transduction]
GO:0042629 [mast cell granule]
GO:0043303 [mast cell degranulation]
GO:0044877 [protein-containing complex binding]
Show all
428 aa
49.6 kDa
No 0
CLNK-202
ENSP00000427208
ENST00000507719
Q7Z7G1
[Direct mapping] Cytokine-dependent hematopoietic cell linker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0035556 [intracellular signal transduction]
Show all
169 aa
19.4 kDa
No 0
CLNK-203
ENSP00000427256
ENST00000515667
D6RJB9
[Direct mapping] Cytokine-dependent hematopoietic cell linker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
166 aa
19.5 kDa
No 0

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