HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:6.8 nTPM
HPA Brain:29.2 nTPM
GTEx:6.8 nTPM
FANTOM5:25.1 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:8.7 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016424
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.2
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
2529 Female, age 94, left hemisphere 28.5
2621 Female, age 67, right hemisphere 25.0
1911 Female, age 85, right hemisphere 20.5
1898 Male, age 80, left hemisphere 19.4
1855 Male, age 76, left hemisphere 18.7
2148 Female, age 91, left hemisphere 18.6
Dentate gyrus
nTPM: 21.4
2530 Female, age 94, left hemisphere 27.8
2531 Female, age 67, both hemispheres 23.4
2246 Female, age 85, both hemispheres 22.2
2010 Male, age 76, both hemispheres 21.5
1927 Female, age 91, both hemispheres 16.9
2528 Male, age 74, both hemispheres 16.8
Entorhinal gyrus
nTPM: 27.0
2686 Male, age 75, right hemisphere 33.5
2117 Female, age 91, right hemisphere 32.8
2613 Female, age 94, left hemisphere 26.4
2764 Male, age 80, right hemisphere 26.4
1787 Male, age 76, left hemisphere 22.5
1938 Female, age 85, left hemisphere 20.3
Hippocampus, CA1
nTPM: 17.7
2082 Female, age 91, right hemisphere 23.2
2527 Male, age 74, both hemispheres 20.4
1873 Female, age 85, both hemispheres 19.0
2045 Male, age 76, both hemispheres 13.3
2749 Male, age 80, left hemisphere 12.6
Hippocampus, CA2
nTPM: 22.6
2437 Female, age 94, left hemisphere 26.0
2113 Female, age 91, right hemisphere 24.4
2249 Male, age 74, both hemispheres 23.3
1963 Male, age 80, left hemisphere 22.6
1940 Female, age 85, left hemisphere 22.5
1892 Male, age 76, both hemispheres 16.7
Hippocampus, CA3
nTPM: 25.0
2436 Male, age 74, both hemispheres 58.6
1891 Female, age 85, both hemispheres 28.8
1867 Male, age 76, both hemispheres 20.8
2861 Female, age 67, both hemispheres 17.4
2137 Male, age 80, left hemisphere 12.9
2620 Female, age 94, left hemisphere 11.7
Parahippocampal cortex
nTPM: 24.4
2692 Male, age 74, both hemispheres 31.6
2532 Female, age 72, left hemisphere 28.8
1990 Female, age 91, right hemisphere 25.4
1850 Male, age 80, both hemispheres 25.3
2622 Female, age 67, right hemisphere 24.3
2245 Female, age 91, both hemispheres 23.4
1933 Female, age 85, both hemispheres 22.6
2018 Male, age 76, both hemispheres 22.6
2693 Female, age 94, both hemispheres 21.6
2250 Female, age 67, right hemisphere 18.7
Perirhinal gyrus
nTPM: 19.9
2521 Female, age 94, right hemisphere 20.4
1841 Female, age 85, right hemisphere 20.2
1847 Female, age 91, left hemisphere 20.1
2848 Male, age 76, right hemisphere 19.9
1794 Male, age 80, right hemisphere 19.0
Subiculum
nTPM: 29.2
2438 Female, age 94, left hemisphere 40.1
2042 Male, age 76, both hemispheres 31.4
1901 Male, age 80, both hemispheres 31.2
1977 Female, age 85, both hemispheres 26.0
2619 Male, age 74, both hemispheres 25.7
2729 Female, age 91, right hemisphere 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.8
Samples: 197

Max nTPM: 14.7
Min nTPM: 1.7
Std nTPM: 2.8
Median nTPM: 6.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 14.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 14.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 14.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 14.5
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 14.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 14.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 13.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 13.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 13.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 12.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 12.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.1
FF:10153-102I9 76 years, female 38.8
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Subiculum
nTPM: 17.4
Samples: 4

Max nTPM: 17.5
Min nTPM: 17.2
Sample A Female 17.3
Sample B Female 17.5
Sample C Male 17.2
Sample D Male 17.4
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 20.8
Min nTPM: 16.3
Sample A Female 17.4
Sample B Female 16.3
Sample C Male 20.8
Sample D Male 17.0
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 15.8
Min nTPM: 13.4
Sample A Female 14.5
Sample B Female 15.8
Sample C Male 13.7
Sample D Male 13.4
Ventral hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 19.7
Min nTPM: 17.1
Sample A Female 18.6
Sample B Female 17.7
Sample C Male 19.7
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.8
Sample A Male 5.8
Sample B Male 5.8
Sample C Female 5.9
Sample D Female 6.6
Hippocampal formation
nTPM: 8.8
Samples: 4

Max nTPM: 12.5
Min nTPM: 5.4
Sample A Male 5.4
Sample B Male 7.8
Sample C Female 9.3
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
74425516 Antisense, RP_051214_02_E02, Mouse strain C57BL/6J (56 days, male) 2.0
68499374 Antisense, RP_050118_01_D09, Mouse strain C57BL/6J (56 days, male) 1.0

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