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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
82.1
nTPM
Monaco:
155.9
nTPM
Schmiedel:
70.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.1
HPA sample
nTPM
gdT-cell nTPM: 73.2
Samples: 6
Max nTPM: 92.6
Min nTPM: 49.4
P10809_1007
49.4
P10809_1022
92.6
P10809_1041
84.1
P10809_1060
71.5
P10809_1077
68.7
P10809_1098
73.0
MAIT T-cell nTPM: 62.7
Samples: 6
Max nTPM: 91.9
Min nTPM: 36.6
P10809_1006
36.6
P10809_1024
62.1
P10809_1043
91.9
P10809_1062
62.8
P10809_1083
45.0
P10809_1097
77.9
Memory CD4 T-cell nTPM: 46.9
Samples: 6
Max nTPM: 58.8
Min nTPM: 32.8
P10809_1014
32.8
P10809_1026
51.5
P10809_1045
50.3
P10809_1064
46.9
P10809_1086
41.2
P10809_1113
58.8
Memory CD8 T-cell nTPM: 82.1
Samples: 5
Max nTPM: 103.3
Min nTPM: 61.7
P10809_1012
71.2
P10809_1027
103.3
P10809_1046
96.7
P10809_1065
61.7
P10809_1111
77.4
Naive CD4 T-cell nTPM: 23.4
Samples: 6
Max nTPM: 27.8
Min nTPM: 15.4
P10809_1015
15.4
P10809_1030
17.3
P10809_1049
27.3
P10809_1068
24.6
P10809_1085
27.7
P10809_1112
27.8
Naive CD8 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 56.7
Min nTPM: 19.1
P10809_1016
19.1
P10809_1031
41.3
P10809_1050
56.7
P10809_1069
46.8
P10809_1087
44.7
P10809_1110
38.8
T-reg nTPM: 34.5
Samples: 6
Max nTPM: 42.5
Min nTPM: 26.2
P10809_1018
27.7
P10809_1037
35.2
P10809_1056
42.5
P10809_1075
26.2
P10809_1094
40.9
P10809_1106
34.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
155.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.7
Samples: 4
Max nTPM: 123.4
Min nTPM: 61.3
RHH5202_R3573
82.5
RHH5230_R3602
123.4
RHH5259_R3631
61.3
RHH5288_R3660
95.5
Effector memory CD8 T-cell nTPM: 141.6
Samples: 4
Max nTPM: 160.5
Min nTPM: 109.8
RHH5203_R3574
150.0
RHH5231_R3603
160.5
RHH5260_R3632
109.8
RHH5289_R3661
145.9
MAIT T-cell nTPM: 103.7
Samples: 4
Max nTPM: 112.9
Min nTPM: 91.3
RHH5233_R3605
112.9
RHH5205_R3576
104.2
RHH5262_R3634
106.5
RHH5297_R3663
91.3
Memory CD4 T-cell TFH nTPM: 79.8
Samples: 4
Max nTPM: 83.2
Min nTPM: 77.0
RHH5300_R3666
77.0
RHH5236_R3608
79.2
RHH5265_R3637
79.9
RHH5208_R3579
83.2
Memory CD4 T-cell Th1 nTPM: 71.1
Samples: 4
Max nTPM: 77.3
Min nTPM: 62.2
RHH5210_R3581
62.2
RHH5302_R3668
77.2
RHH5238_R3610
67.5
RHH5267_R3639
77.3
Memory CD4 T-cell Th1/Th17 nTPM: 79.0
Samples: 4
Max nTPM: 96.1
Min nTPM: 51.4
RHH5303_R3669
96.1
RHH5211_R3582
94.8
RHH5239_R3611
51.4
RHH5268_R3640
73.7
Memory CD4 T-cell Th17 nTPM: 90.1
Samples: 4
Max nTPM: 104.2
Min nTPM: 76.9
RHH5304_R3670
84.1
RHH5212_R3583
95.0
RHH5240_R3612
104.2
RHH5269_R3641
76.9
Memory CD4 T-cell Th2 nTPM: 98.8
Samples: 4
Max nTPM: 104.8
Min nTPM: 85.0
RHH5305_R3671
102.0
RHH5213_R3584
103.3
RHH5241_R3613
104.8
RHH5270_R3642
85.0
Naive CD4 T-cell nTPM: 41.8
Samples: 4
Max nTPM: 48.5
Min nTPM: 38.4
RHH5306_R3672
48.5
RHH5214_R3585
41.8
RHH5242_R3614
38.5
RHH5271_R3643
38.4
Naive CD8 T-cell nTPM: 40.4
Samples: 4
Max nTPM: 48.0
Min nTPM: 26.9
RHH5201_R3572
48.0
RHH5229_R3601
26.9
RHH5258_R3630
41.5
RHH5287_R3659
45.0
Non-Vd2 gdTCR nTPM: 154.0
Samples: 4
Max nTPM: 169.7
Min nTPM: 129.3
RHH5235_R3607
168.6
RHH5264_R3636
129.3
RHH5207_R3578
148.2
RHH5299_R3665
169.7
T-reg nTPM: 57.4
Samples: 4
Max nTPM: 62.8
Min nTPM: 48.6
RHH5301_R3667
48.6
RHH5237_R3609
59.9
RHH5266_R3638
58.2
RHH5209_R3580
62.8
Terminal effector memory CD4 T-cell nTPM: 155.9
Samples: 2
Max nTPM: 190.5
Min nTPM: 121.3
RHH5243_R3615
190.5
RHH5272_R3644
121.3
Terminal effector memory CD8 T-cell nTPM: 151.4
Samples: 4
Max nTPM: 196.8
Min nTPM: 126.1
RHH5232_R3604
196.8
RHH5204_R3575
140.0
RHH5261_R3633
126.1
RHH5296_R3662
142.7
Vd2 gdTCR nTPM: 110.2
Samples: 4
Max nTPM: 119.1
Min nTPM: 100.1
RHH5234_R3606
116.5
RHH5206_R3577
119.1
RHH5263_R3635
105.0
RHH5298_R3664
100.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
