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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
141.3
nTPM
Monaco:
96.3
nTPM
Schmiedel:
50.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
141.3
HPA sample
nTPM
gdT-cell nTPM: 64.4
Samples: 6
Max nTPM: 82.8
Min nTPM: 37.7
P10809_1007
37.7
P10809_1022
82.8
P10809_1041
79.9
P10809_1060
61.3
P10809_1077
58.7
P10809_1098
66.2
MAIT T-cell nTPM: 73.6
Samples: 6
Max nTPM: 115.6
Min nTPM: 46.3
P10809_1006
46.3
P10809_1024
115.6
P10809_1043
66.3
P10809_1062
77.1
P10809_1083
73.3
P10809_1097
62.8
Memory CD4 T-cell nTPM: 74.3
Samples: 6
Max nTPM: 94.1
Min nTPM: 44.9
P10809_1014
44.9
P10809_1026
94.1
P10809_1045
81.0
P10809_1064
72.4
P10809_1086
84.1
P10809_1113
69.3
Memory CD8 T-cell nTPM: 69.2
Samples: 5
Max nTPM: 77.9
Min nTPM: 46.3
P10809_1012
46.3
P10809_1027
73.8
P10809_1046
77.9
P10809_1065
72.8
P10809_1111
75.2
Naive CD4 T-cell nTPM: 64.2
Samples: 6
Max nTPM: 85.2
Min nTPM: 38.5
P10809_1015
38.5
P10809_1030
61.0
P10809_1049
85.2
P10809_1068
72.2
P10809_1085
70.4
P10809_1112
57.6
Naive CD8 T-cell nTPM: 62.9
Samples: 6
Max nTPM: 73.5
Min nTPM: 37.0
P10809_1016
37.0
P10809_1031
71.0
P10809_1050
67.8
P10809_1069
73.5
P10809_1087
68.2
P10809_1110
59.7
T-reg nTPM: 141.3
Samples: 6
Max nTPM: 183.5
Min nTPM: 84.4
P10809_1018
84.4
P10809_1037
165.6
P10809_1056
145.1
P10809_1075
128.9
P10809_1094
140.2
P10809_1106
183.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.6
Samples: 4
Max nTPM: 93.7
Min nTPM: 61.8
RHH5202_R3573
61.8
RHH5230_R3602
68.5
RHH5259_R3631
62.5
RHH5288_R3660
93.7
Effector memory CD8 T-cell nTPM: 88.2
Samples: 4
Max nTPM: 113.2
Min nTPM: 58.1
RHH5203_R3574
113.2
RHH5231_R3603
112.4
RHH5260_R3632
58.1
RHH5289_R3661
69.2
MAIT T-cell nTPM: 81.8
Samples: 4
Max nTPM: 91.0
Min nTPM: 73.6
RHH5233_R3605
79.8
RHH5205_R3576
73.6
RHH5262_R3634
91.0
RHH5297_R3663
82.8
Memory CD4 T-cell TFH nTPM: 74.0
Samples: 4
Max nTPM: 94.1
Min nTPM: 38.7
RHH5300_R3666
77.1
RHH5236_R3608
94.1
RHH5265_R3637
86.0
RHH5208_R3579
38.7
Memory CD4 T-cell Th1 nTPM: 73.0
Samples: 4
Max nTPM: 82.3
Min nTPM: 62.7
RHH5210_R3581
81.6
RHH5302_R3668
82.3
RHH5238_R3610
62.7
RHH5267_R3639
65.4
Memory CD4 T-cell Th1/Th17 nTPM: 73.7
Samples: 4
Max nTPM: 91.9
Min nTPM: 52.6
RHH5303_R3669
81.5
RHH5211_R3582
91.9
RHH5239_R3611
52.6
RHH5268_R3640
68.9
Memory CD4 T-cell Th17 nTPM: 82.1
Samples: 4
Max nTPM: 112.6
Min nTPM: 55.1
RHH5304_R3670
55.1
RHH5212_R3583
112.6
RHH5240_R3612
94.0
RHH5269_R3641
66.5
Memory CD4 T-cell Th2 nTPM: 81.6
Samples: 4
Max nTPM: 83.8
Min nTPM: 78.7
RHH5305_R3671
83.5
RHH5213_R3584
80.2
RHH5241_R3613
83.8
RHH5270_R3642
78.7
Naive CD4 T-cell nTPM: 68.6
Samples: 4
Max nTPM: 80.7
Min nTPM: 60.7
RHH5306_R3672
64.8
RHH5214_R3585
80.7
RHH5242_R3614
60.7
RHH5271_R3643
68.0
Naive CD8 T-cell nTPM: 53.1
Samples: 4
Max nTPM: 57.7
Min nTPM: 41.1
RHH5201_R3572
57.7
RHH5229_R3601
41.1
RHH5258_R3630
56.5
RHH5287_R3659
57.0
Non-Vd2 gdTCR nTPM: 87.6
Samples: 4
Max nTPM: 97.2
Min nTPM: 75.4
RHH5235_R3607
75.4
RHH5264_R3636
97.2
RHH5207_R3578
93.7
RHH5299_R3665
84.1
T-reg nTPM: 91.5
Samples: 4
Max nTPM: 122.0
Min nTPM: 73.2
RHH5301_R3667
81.6
RHH5237_R3609
122.0
RHH5266_R3638
73.2
RHH5209_R3580
89.1
Terminal effector memory CD4 T-cell nTPM: 96.4
Samples: 2
Max nTPM: 101.3
Min nTPM: 91.4
RHH5243_R3615
101.3
RHH5272_R3644
91.4
Terminal effector memory CD8 T-cell nTPM: 89.3
Samples: 4
Max nTPM: 124.3
Min nTPM: 57.9
RHH5232_R3604
124.3
RHH5204_R3575
105.6
RHH5261_R3633
69.5
RHH5296_R3662
57.9
Vd2 gdTCR nTPM: 88.7
Samples: 4
Max nTPM: 117.7
Min nTPM: 78.9
RHH5234_R3606
78.9
RHH5206_R3577
117.7
RHH5263_R3635
79.0
RHH5298_R3664
79.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
