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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
230.6
nTPM
Monaco:
679.5
nTPM
Schmiedel:
34.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
230.6
HPA sample
nTPM
gdT-cell nTPM: 230.6
Samples: 6
Max nTPM: 333.7
Min nTPM: 133.2
P10809_1007
278.5
P10809_1022
333.7
P10809_1041
244.1
P10809_1060
133.2
P10809_1077
199.4
P10809_1098
194.7
MAIT T-cell nTPM: 195.3
Samples: 6
Max nTPM: 253.2
Min nTPM: 160.3
P10809_1006
253.2
P10809_1024
204.8
P10809_1043
172.0
P10809_1062
167.8
P10809_1083
160.3
P10809_1097
213.5
Memory CD4 T-cell nTPM: 99.9
Samples: 6
Max nTPM: 121.0
Min nTPM: 66.6
P10809_1014
93.0
P10809_1026
66.6
P10809_1045
99.7
P10809_1064
121.0
P10809_1086
119.6
P10809_1113
99.6
Memory CD8 T-cell nTPM: 198.3
Samples: 5
Max nTPM: 232.5
Min nTPM: 169.4
P10809_1012
201.8
P10809_1027
188.4
P10809_1046
232.5
P10809_1065
199.2
P10809_1111
169.4
Naive CD4 T-cell nTPM: 49.7
Samples: 6
Max nTPM: 63.0
Min nTPM: 40.5
P10809_1015
54.3
P10809_1030
51.8
P10809_1049
40.5
P10809_1068
41.4
P10809_1085
63.0
P10809_1112
46.9
Naive CD8 T-cell nTPM: 115.7
Samples: 6
Max nTPM: 216.1
Min nTPM: 68.5
P10809_1016
68.5
P10809_1031
90.8
P10809_1050
102.8
P10809_1069
140.0
P10809_1087
216.1
P10809_1110
76.2
T-reg nTPM: 163.2
Samples: 6
Max nTPM: 195.5
Min nTPM: 127.9
P10809_1018
195.5
P10809_1037
165.5
P10809_1056
133.4
P10809_1075
127.9
P10809_1094
169.2
P10809_1106
187.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
679.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 190.6
Samples: 4
Max nTPM: 227.9
Min nTPM: 136.8
RHH5202_R3573
207.1
RHH5230_R3602
227.9
RHH5259_R3631
136.8
RHH5288_R3660
190.4
Effector memory CD8 T-cell nTPM: 598.5
Samples: 4
Max nTPM: 700.5
Min nTPM: 439.0
RHH5203_R3574
631.2
RHH5231_R3603
700.5
RHH5260_R3632
439.0
RHH5289_R3661
623.2
MAIT T-cell nTPM: 414.4
Samples: 4
Max nTPM: 502.7
Min nTPM: 330.4
RHH5233_R3605
502.7
RHH5205_R3576
422.4
RHH5262_R3634
402.1
RHH5297_R3663
330.4
Memory CD4 T-cell TFH nTPM: 145.1
Samples: 4
Max nTPM: 167.7
Min nTPM: 131.6
RHH5300_R3666
131.6
RHH5236_R3608
148.2
RHH5265_R3637
133.0
RHH5208_R3579
167.7
Memory CD4 T-cell Th1 nTPM: 184.2
Samples: 4
Max nTPM: 195.6
Min nTPM: 168.2
RHH5210_R3581
168.2
RHH5302_R3668
189.5
RHH5238_R3610
183.3
RHH5267_R3639
195.6
Memory CD4 T-cell Th1/Th17 nTPM: 195.7
Samples: 4
Max nTPM: 223.5
Min nTPM: 173.4
RHH5303_R3669
223.5
RHH5211_R3582
212.2
RHH5239_R3611
173.4
RHH5268_R3640
173.6
Memory CD4 T-cell Th17 nTPM: 196.4
Samples: 4
Max nTPM: 238.7
Min nTPM: 173.2
RHH5304_R3670
238.7
RHH5212_R3583
173.2
RHH5240_R3612
184.7
RHH5269_R3641
189.1
Memory CD4 T-cell Th2 nTPM: 160.5
Samples: 4
Max nTPM: 177.5
Min nTPM: 148.6
RHH5305_R3671
157.7
RHH5213_R3584
158.0
RHH5241_R3613
148.6
RHH5270_R3642
177.5
Naive CD4 T-cell nTPM: 100.6
Samples: 4
Max nTPM: 111.3
Min nTPM: 85.6
RHH5306_R3672
85.6
RHH5214_R3585
100.1
RHH5242_R3614
105.3
RHH5271_R3643
111.3
Naive CD8 T-cell nTPM: 99.2
Samples: 4
Max nTPM: 128.1
Min nTPM: 75.4
RHH5201_R3572
128.1
RHH5229_R3601
87.0
RHH5258_R3630
75.4
RHH5287_R3659
106.2
Non-Vd2 gdTCR nTPM: 587.6
Samples: 4
Max nTPM: 689.8
Min nTPM: 459.7
RHH5235_R3607
616.2
RHH5264_R3636
459.7
RHH5207_R3578
689.8
RHH5299_R3665
584.5
T-reg nTPM: 145.3
Samples: 4
Max nTPM: 151.0
Min nTPM: 141.5
RHH5301_R3667
142.6
RHH5237_R3609
146.2
RHH5266_R3638
151.0
RHH5209_R3580
141.5
Terminal effector memory CD4 T-cell nTPM: 679.5
Samples: 2
Max nTPM: 783.9
Min nTPM: 575.1
RHH5243_R3615
783.9
RHH5272_R3644
575.1
Terminal effector memory CD8 T-cell nTPM: 636.7
Samples: 4
Max nTPM: 758.2
Min nTPM: 381.2
RHH5232_R3604
758.2
RHH5204_R3575
711.1
RHH5261_R3633
381.2
RHH5296_R3662
696.4
Vd2 gdTCR nTPM: 488.5
Samples: 4
Max nTPM: 694.4
Min nTPM: 381.9
RHH5234_R3606
486.2
RHH5206_R3577
694.4
RHH5263_R3635
381.9
RHH5298_R3664
391.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
